Gene SeD_A1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1145 
SymbolompA 
ID6874754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1139444 
End bp1140553 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content54% 
IMG OID642784329 
Productouter membrane protein A 
Protein accessionYP_002215003 
Protein GI198244081 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00470585 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTATCTC GTTGGAGATA TTCATGGCGT ATTTTGGATG ATAACGAGGC GCAAAAAATG 
AAAAAGACAG CTATCGCGAT TGCAGTGGCA CTGGCTGGTT TCGCTACCGT AGCGCAGGCC
GCTCCGAAAG ATAACACCTG GTACGCTGGT GCTAAACTGG GCTGGTCTCA GTACCATGAC
ACCGGCTTCA TTCACAATGA TGGCCCGACT CATGAAAACC AACTGGGCGC AGGTGCTTTT
GGTGGTTACC AGGTTAACCC GTATGTTGGC TTTGAAATGG GCTACGACTG GTTAGGCCGT
ATGCCGTACA AAGGCGACAA CATCAATGGC GCTTATAAAG CTCAGGGCGT TCAGTTGACC
GCTAAACTGG GTTATCCAAT CACTGACGAT CTGGACGTTT ATACCCGTCT GGGTGGTATG
GTATGGCGTG CAGACACCAA GTCTAACGTC CCTGGCGGCC CGTCTACTAA AGACCACGAC
ACCGGCGTTT CCCCGGTATT CGCGGGCGGT ATCGAGTATG CCATCACCCC TGAAATCGCA
ACCCGTCTGG AATACCAGTG GACTAACAAC ATCGGTGATG CCAACACCAT CGGCACCCGT
CCGGACAACG GCCTGCTGAG CGTAGGTGTT TCCTACCGTT TCGGCCAGCA AGAAGCTGCT
CCGGTAGTAG CTCCGGCACC GGCTCCGGCT CCGGAAGTAC AGACCAAGCA CTTCACTCTG
AAGTCTGACG TACTGTTCAA CTTCAACAAA TCTACCCTGA AGCCGGAAGG CCAGCAGGCT
CTGGATCAGC TGTACAGCCA GCTGAGCAAC CTGGATCCGA AAGACGGTTC CGTTGTCGTT
CTGGGCTTCA CTGACCGTAT CGGTTCTGAC GCTTACAACC AGGGTCTGTC CGAGAAACGT
GCTCAGTCTG TTGTTGATTA CCTGATCTCC AAAGGTATTC CGTCTGACAA AATCTCCGCA
CGTGGTATGG GCGAATCTAA CCCGGTTACC GGCAACACCT GTGACAACGT GAAACCTCGC
GCTGCCCTGA TCGATTGCCT GGCTCCGGAT CGTCGCGTAG AGATCGAAGT TAAAGGCGTT
AAAGACGTGG TAACTCAGCC GCAGGCTTAA
 
Protein sequence
MLSRWRYSWR ILDDNEAQKM KKTAIAIAVA LAGFATVAQA APKDNTWYAG AKLGWSQYHD 
TGFIHNDGPT HENQLGAGAF GGYQVNPYVG FEMGYDWLGR MPYKGDNING AYKAQGVQLT
AKLGYPITDD LDVYTRLGGM VWRADTKSNV PGGPSTKDHD TGVSPVFAGG IEYAITPEIA
TRLEYQWTNN IGDANTIGTR PDNGLLSVGV SYRFGQQEAA PVVAPAPAPA PEVQTKHFTL
KSDVLFNFNK STLKPEGQQA LDQLYSQLSN LDPKDGSVVV LGFTDRIGSD AYNQGLSEKR
AQSVVDYLIS KGIPSDKISA RGMGESNPVT GNTCDNVKPR AALIDCLAPD RRVEIEVKGV
KDVVTQPQA