Gene SeD_A1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1144 
Symbol 
ID6875300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1138920 
End bp1139372 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content47% 
IMG OID642784328 
Producthypothetical protein 
Protein accessionYP_002215002 
Protein GI198245310 
COG category[S] Function unknown 
COG ID[COG3120] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000646309 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATC AACAACTTGA AAATCTTGAA AGCGGTTGGA AATGGAAATA TCTGGTGAAA 
AAGCACCGCG AAGGGGAGTT GATCACCCGC TACGTGGAAG CCAGTGCTGC CCAGGAAGCC 
GTCAATTTGT TGTTGGCCCT CGAAAATGAA CCGGTGCGGG TAAATGTCTG GATAGACAGG 
CATATGAATC CTGCCTTGCT TAATCGGATG AAACAAACCA TTCGGGCAAG ACGCAAACGA 
CACTTCAATG CGGAACATCA GCATACGCGC AAAAAATCTA TCGATTTAGA GTTTATGGTC 
TGGCAGCGTC TGGCGGGCCT TGCGCAGCGA CGCGGTAAAA CATTATCCGA AACGATAGTG 
CAACTGATAG AAGACGCGGA GCATAAAGAG AAATATGCCA CGCAAATGAC CACGTTAAAG 
CAGGATTTAC AGGCGTTATT AGGCAAGAAG TAA
 
Protein sequence
MKYQQLENLE SGWKWKYLVK KHREGELITR YVEASAAQEA VNLLLALENE PVRVNVWIDR 
HMNPALLNRM KQTIRARRKR HFNAEHQHTR KKSIDLEFMV WQRLAGLAQR RGKTLSETIV 
QLIEDAEHKE KYATQMTTLK QDLQALLGKK