Gene SeD_A1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1136 
SymbolrlmL 
ID6874591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1128363 
End bp1130471 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content55% 
IMG OID642784320 
Product23S rRNA m(2)G2445 methyltransferase 
Protein accessionYP_002214994 
Protein GI198242133 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.237115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCTC TGTTTGCCAG TACGGCCCGC GGGCTGGAAG AGCTGTTAAA AACTGAACTG 
GAAAAACTGG GCGCCGTAGG GTGTCAGGTT GTTCAGGGTG GGGTCCATTT TCAGGGCGAC
ACGCGGCTTA TTTACCAGAG CCTGATGTGG AGCCGCCTGG CCTCGCGTAT TATCCTGCCG
ATGGGTGAGT GCAAGGTCTA CAGCGATCTC GATCTTTACC TCGGCGTTCA GGCGATAAAC
TGGACAGAGA TTTTTAATCC TGGCGCGACG TTTGCGGTGC ATTTCAGCGG CCTGAACGAC
ACCATCCGTA ATAGTCAGTA TGGCGCGATG AAAGTTAAAG ACGCGATTGT CGATGCGTTT
ACGCGGAAAA ATCTTCCGCG TCCAAATGTG GACCGCGAAT CGCCGGACCT CCGTATTAAC
GTCTGGCTGA ATAAAGAAAC TGCCAGCATT GCGCTGGATC TCAGTGGTGA TGGCCTGCAC
CTGCGCGGTT ATCGCGATCG CACCGGGCTG GCGCCAATTA AAGAGACGCT GGCGGCAGCG
ATTGTTATGC GTTCCGGCTG GCAACCAGGT ACGCCGCTGC TCGACCCTAT GTGTGGTTCG
GGGACACTGT TGATTGAGGC CGCGATGTGG GCGACCGATC GCGCGCCGGG ACTGCACCGT
GGTCACTGGG GATTTAGCGG CTGGGCGCAG CATGACGAAA CTATCTGGCA GGAAGTGAAA
GCCGAAGCGC AGACCCGGGC GCGTAAGGGG CTGGCGGAGT ATTCCTCTCA TTTCTACGGT
TCCGACAGCG ATGCGCGCGT CATTGAGCGG GCGCGCAGCA ACGCCCGTCG CGCCGGTATC
GGGGAGCTTA TCACCTTTGA AGTGAAAGAT GTGGCGCAAC TGAGTAATCC ATTGCCGAAA
GGCCCGTATG GTACGGTGAT CAGTAACCCG CCTTACGGCG AACGTCTGGA CAGCGAACCG
GCGCTGATTG CGTTGCACAG TCTGCTGGGC CGTACCATGA AAAATCAGTT TGGCGGCTGG
AACCTGTCGC TGTTCAGCGC TTCGCCCGAT TTGCTGGGCA GCCTGCAATT ACGTGCCGAC
AAACAGTTTA AAGCCAAGAA TGGCCCGCTG GACTGCGTGC AGAAAAACTA TCATATTGCG
GAAACCACGG CGGACAGTAA ACCGGCGACG GTGGCGGAAG ATTACGCTAA CCGCCTGCGT
AAAAATCTTA AAAAGCTGGA GAAATGGGCG CGCCAGGAAG GGATTGAATG CTATCGCTTG
TATGATGCCG ACCTGCCGGA ATATAACGTG GCGGTAGACC GTTACGGCGA CTGGGCGGTG
ATTCAGGAAT ATGCGCCGCC GAAAACGGTG GATGCGCAAA AAGCGCGGCA GCGCCTGTTC
GATATTATTG CGGCAACCTT GTCAGTGCTC GGTATTCCGC CGAATAAACT GGTGTTAAAA
ACCCGTGAAC GGCAAAAAGG AAAAAACCAG TATCAGAAAA TGAGCGAGAA GGGCGAGTTC
CTTGAAGTCA GCGAATATAA TGCGCGCTTA TGGGTAAATC TGACGGATTA TCTCGACACC
GGTCTGTTCC TCGATCACCG TATTGCCCGC AGGATGCTGG GAGAAATGAG CAAAGGCAAA
GATTTCCTGA ATCTCTTTTC TTATACCGGC AGCGCCAGCG TACATGCGGG TCTGGGCGGC
GCGCGCAGCA CCACAACGGT GGATATGTCC CGCACCTATC TGGAGTGGGC CGAACGTAAT
TTGCGTCTGA ACGGACTGAG CGGCCGCGCG CATCGCCTGA TTCAGGCCGA CTGCCTGGGC
TGGCTGCGCG AGGCGAATGA ACAGTTCGAT TTGATCTTTA TCGATCCGCC GACGTTCTCT
AACTCAAAAC GTATGGAAGA GTCGTTTGAT GTTCAGCGCG ATCATGTCGC GTTAATGAAA
GATTTAAAAC GTCTGCTGCG TAAAGGCGGC ACCATCATGT TCTCAAATAA TAAGCGCGGA
TTCCGTATGG ATCTGGAAGG GCTGGCTGAG CTGGGGCTTA CCGCACAAGA AATTACGCAA
AAAACGCTTT CCCCGGATTT TGCCCGTAAC CGTCAGATCC ATAACTGCTG GCTGATCCGC
GCCGCCTGA
 
Protein sequence
MNSLFASTAR GLEELLKTEL EKLGAVGCQV VQGGVHFQGD TRLIYQSLMW SRLASRIILP 
MGECKVYSDL DLYLGVQAIN WTEIFNPGAT FAVHFSGLND TIRNSQYGAM KVKDAIVDAF
TRKNLPRPNV DRESPDLRIN VWLNKETASI ALDLSGDGLH LRGYRDRTGL APIKETLAAA
IVMRSGWQPG TPLLDPMCGS GTLLIEAAMW ATDRAPGLHR GHWGFSGWAQ HDETIWQEVK
AEAQTRARKG LAEYSSHFYG SDSDARVIER ARSNARRAGI GELITFEVKD VAQLSNPLPK
GPYGTVISNP PYGERLDSEP ALIALHSLLG RTMKNQFGGW NLSLFSASPD LLGSLQLRAD
KQFKAKNGPL DCVQKNYHIA ETTADSKPAT VAEDYANRLR KNLKKLEKWA RQEGIECYRL
YDADLPEYNV AVDRYGDWAV IQEYAPPKTV DAQKARQRLF DIIAATLSVL GIPPNKLVLK
TRERQKGKNQ YQKMSEKGEF LEVSEYNARL WVNLTDYLDT GLFLDHRIAR RMLGEMSKGK
DFLNLFSYTG SASVHAGLGG ARSTTTVDMS RTYLEWAERN LRLNGLSGRA HRLIQADCLG
WLREANEQFD LIFIDPPTFS NSKRMEESFD VQRDHVALMK DLKRLLRKGG TIMFSNNKRG
FRMDLEGLAE LGLTAQEITQ KTLSPDFARN RQIHNCWLIR AA