Gene SeD_A1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1061 
Symbol 
ID6874096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1067091 
End bp1067639 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content52% 
IMG OID642784246 
Producthypothetical protein 
Protein accessionYP_002214920 
Protein GI198245161 
COG category[S] Function unknown 
COG ID[COG3108] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.000755595 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAAAT TTGACGCTAA TCGCCGCAAG CTGCTGGCGC TTGGTGGTGT CGCTCTCGGC 
GCCGCCATCC TGCCCGCGCC AGCGTTTGCC ACACTCTCGA CCCCACGCCC GCGCATTTTG
ACGTTAAACA ATCTCCATAC CGGAGAGTCA ATCAAGGCGG AGTTTTTCGA TGGAAGAGCC
TACATTCAGG ATGAATTAGC AAAGTTAAAC CATTTTTTCC GTGACTATCG CGCGAATAAA
GTCCGATCAA TCGATCCCCG CCTGTTTGAC CAACTTTACC GACTTCAGGG GCTGTTAGGG
ACGCGTAAAC CTGTGCAGCT CATCTCAGGC TACCGTTCTC TTGATACCAA TAATGAATTA
CGCGCCCGTA GCAGCGGCGT AGCGAAAAAA AGCTACCATA CAAAAGGGCA GGCGATGGAT
TTTCATATTG AAGGCGTGGC GCTGAGCAAT ATTCGCAAAG CGGCGTTATC TATGCGCGCA
GGTGGTGTAG GATATTACCC ACGTAGTAAC TTTGTGCATA TTGATACCGG GCCGGCGCGG
CACTGGTAA
 
Protein sequence
MDKFDANRRK LLALGGVALG AAILPAPAFA TLSTPRPRIL TLNNLHTGES IKAEFFDGRA 
YIQDELAKLN HFFRDYRANK VRSIDPRLFD QLYRLQGLLG TRKPVQLISG YRSLDTNNEL
RARSSGVAKK SYHTKGQAMD FHIEGVALSN IRKAALSMRA GGVGYYPRSN FVHIDTGPAR
HW