Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1028 |
Symbol | serS |
ID | 6874359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1023765 |
End bp | 1025057 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642784213 |
Product | seryl-tRNA synthetase |
Protein accession | YP_002214887 |
Protein GI | 198244710 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATC CCAATCTGCT GCGTAATGAG CCAGACGCAG TCGCTGAAAA ACTGGCACGC CGGGGCTTTA AGCTGGATGT AGATAAGCTG CGCGCTCTTG AAGAGCGTCG TAAAGTTTTG CAGGTCAACA CGGAAAACCT GCAGGCGGAG CGTAATTCTC GATCGAAATC CATCGGCCAG GCGAAAGCGC GCGGGGAAGA TATCGAGCCT TTACGCCTGG AAGTGAATAA ACTGGGCGAA GAGCTGGATG CGGCGAAAGC CGAGCTGGAT ACCTTGCTGG CGGAGATCCG CGATATCGCA CTGACCATCC CAAACCTGCC TGCGGATGAA GTGCCGGTAG GTAAAGATGA AAACGACAAC GTTGAAGTCA GCCGCTGGGG TACCCCGCGT GAGTTTGATT TTGAAATCCG CGATCACGTC ACCTTAGGGG AAATGCACTC CGGCCTCGAC TTTGCCGCCG CGGTTAAGCT GACCGGCTCC CGTTTTGTGG TGATGAAAGG ACAGATTGCG CGTATGCATC GCGCATTGTC GCAGTTCATG TTGGATCTGC ATACGGAACA GCACGGCTAT AGCGAAAACT ACGTGCCGTA TCTGGTTAAC CACGACACGC TGTATGGCAC CGGTCAACTG CCGAAATTCG CAGGCGACTT GTTCCATACC CGTCCGCTGG AAGAAGAAGC AGACAGCAGC AACTATGCTT TGATCCCGAC GGCGGAGGTT CCGCTGACCA ATCTGGTACG CGATGAAATC ATCGACGAAG ATCAACTGCC GATTAAAATG ACGGCGCATA CGCCTTGTTT CCGTTCTGAA GCAGGTTCTT ATGGTCGTGA TACCCGTGGC CTGATTCGTA TGCATCAGTT TGACAAAGTT GAGATGGTGC AGATCGTTCG CCCGGAAGAT TCTATGGCTG CGTTGGAAGA GATGACCGGC CACGCGGAAA AAGTGCTCCA GCTACTGGGA CTGCCGTACC GTAAAATCAT TCTGTGCACT GGCGATATGG GCTTCGGCGC CTGCAAAACC TATGACCTCG AAGTCTGGGT TCCGGCGCAG AATACCTACC GCGAGATCTC TTCCTGCTCT AACGTCTGGG ACTTCCAGGC GCGTCGTATG CAGGCACGTT GTCGCAGCAA GTCCGACAAA AAGACCCGTC TGGTCCATAC CCTGAATGGT TCTGGTCTGG CGGTAGGTCG TACCCTGGTG GCTGTGATGG AAAACTATCA GCAGGCTGAT GGCCGCATTG AAGTGCCGGA AGTATTACGT CCGTACATGA ACGGACTGGA ATATATCGGC TAA
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Protein sequence | MLDPNLLRNE PDAVAEKLAR RGFKLDVDKL RALEERRKVL QVNTENLQAE RNSRSKSIGQ AKARGEDIEP LRLEVNKLGE ELDAAKAELD TLLAEIRDIA LTIPNLPADE VPVGKDENDN VEVSRWGTPR EFDFEIRDHV TLGEMHSGLD FAAAVKLTGS RFVVMKGQIA RMHRALSQFM LDLHTEQHGY SENYVPYLVN HDTLYGTGQL PKFAGDLFHT RPLEEEADSS NYALIPTAEV PLTNLVRDEI IDEDQLPIKM TAHTPCFRSE AGSYGRDTRG LIRMHQFDKV EMVQIVRPED SMAALEEMTG HAEKVLQLLG LPYRKIILCT GDMGFGACKT YDLEVWVPAQ NTYREISSCS NVWDFQARRM QARCRSKSDK KTRLVHTLNG SGLAVGRTLV AVMENYQQAD GRIEVPEVLR PYMNGLEYIG
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