Gene SeD_A1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1028 
SymbolserS 
ID6874359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1023765 
End bp1025057 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content54% 
IMG OID642784213 
Productseryl-tRNA synthetase 
Protein accessionYP_002214887 
Protein GI198244710 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATC CCAATCTGCT GCGTAATGAG CCAGACGCAG TCGCTGAAAA ACTGGCACGC 
CGGGGCTTTA AGCTGGATGT AGATAAGCTG CGCGCTCTTG AAGAGCGTCG TAAAGTTTTG
CAGGTCAACA CGGAAAACCT GCAGGCGGAG CGTAATTCTC GATCGAAATC CATCGGCCAG
GCGAAAGCGC GCGGGGAAGA TATCGAGCCT TTACGCCTGG AAGTGAATAA ACTGGGCGAA
GAGCTGGATG CGGCGAAAGC CGAGCTGGAT ACCTTGCTGG CGGAGATCCG CGATATCGCA
CTGACCATCC CAAACCTGCC TGCGGATGAA GTGCCGGTAG GTAAAGATGA AAACGACAAC
GTTGAAGTCA GCCGCTGGGG TACCCCGCGT GAGTTTGATT TTGAAATCCG CGATCACGTC
ACCTTAGGGG AAATGCACTC CGGCCTCGAC TTTGCCGCCG CGGTTAAGCT GACCGGCTCC
CGTTTTGTGG TGATGAAAGG ACAGATTGCG CGTATGCATC GCGCATTGTC GCAGTTCATG
TTGGATCTGC ATACGGAACA GCACGGCTAT AGCGAAAACT ACGTGCCGTA TCTGGTTAAC
CACGACACGC TGTATGGCAC CGGTCAACTG CCGAAATTCG CAGGCGACTT GTTCCATACC
CGTCCGCTGG AAGAAGAAGC AGACAGCAGC AACTATGCTT TGATCCCGAC GGCGGAGGTT
CCGCTGACCA ATCTGGTACG CGATGAAATC ATCGACGAAG ATCAACTGCC GATTAAAATG
ACGGCGCATA CGCCTTGTTT CCGTTCTGAA GCAGGTTCTT ATGGTCGTGA TACCCGTGGC
CTGATTCGTA TGCATCAGTT TGACAAAGTT GAGATGGTGC AGATCGTTCG CCCGGAAGAT
TCTATGGCTG CGTTGGAAGA GATGACCGGC CACGCGGAAA AAGTGCTCCA GCTACTGGGA
CTGCCGTACC GTAAAATCAT TCTGTGCACT GGCGATATGG GCTTCGGCGC CTGCAAAACC
TATGACCTCG AAGTCTGGGT TCCGGCGCAG AATACCTACC GCGAGATCTC TTCCTGCTCT
AACGTCTGGG ACTTCCAGGC GCGTCGTATG CAGGCACGTT GTCGCAGCAA GTCCGACAAA
AAGACCCGTC TGGTCCATAC CCTGAATGGT TCTGGTCTGG CGGTAGGTCG TACCCTGGTG
GCTGTGATGG AAAACTATCA GCAGGCTGAT GGCCGCATTG AAGTGCCGGA AGTATTACGT
CCGTACATGA ACGGACTGGA ATATATCGGC TAA
 
Protein sequence
MLDPNLLRNE PDAVAEKLAR RGFKLDVDKL RALEERRKVL QVNTENLQAE RNSRSKSIGQ 
AKARGEDIEP LRLEVNKLGE ELDAAKAELD TLLAEIRDIA LTIPNLPADE VPVGKDENDN
VEVSRWGTPR EFDFEIRDHV TLGEMHSGLD FAAAVKLTGS RFVVMKGQIA RMHRALSQFM
LDLHTEQHGY SENYVPYLVN HDTLYGTGQL PKFAGDLFHT RPLEEEADSS NYALIPTAEV
PLTNLVRDEI IDEDQLPIKM TAHTPCFRSE AGSYGRDTRG LIRMHQFDKV EMVQIVRPED
SMAALEEMTG HAEKVLQLLG LPYRKIILCT GDMGFGACKT YDLEVWVPAQ NTYREISSCS
NVWDFQARRM QARCRSKSDK KTRLVHTLNG SGLAVGRTLV AVMENYQQAD GRIEVPEVLR
PYMNGLEYIG