Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1026 |
Symbol | lolA |
ID | 6872906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1021542 |
End bp | 1022153 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642784211 |
Product | outer-membrane lipoprotein carrier protein |
Protein accession | YP_002214885 |
Protein GI | 198243173 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TGGCAATCGC CTGTGCATTA CTTTCAAGCG TTGTAGCCAG CAGCGTATGG GCTGACGCCG CCAGCTCTCT GAAAAGCCGT CTGGATAAAG TGAGCAGCTT TCATGCCACC TTTACTCAAA AAGTCACCGA TGGCAGCGGT GCCGCGGTGC AGGAGGGACA GGGTGATTTA TGGGTTAAGC GGCCAAATCT ATTCAACTGG CATATGACGC AACCTGACGA GAGTATTCTG GTTTCTGACG GCAAAACGTT ATGGTTCTAT AACCCGTTTG TAGAACAGGC TACCGCCACG TGGTTGAAAG ATGCCACTGG AAATACACCG TTTATGCTGA TTGCCCGCAA CCAGGCCAGC GACTGGCAGC AGTATAATAT TAAGCAGGAT GGCGATAATT TTGTGCTGAC GCCGAAAGCC AGCAACGGCA ATCTGAAACA GTTCACCATC AATGTGGGAC GCGACGGGAC TATCCACCAG TTTAGCGCCG TAGAACAAGA CGATCAGCGT AGCGCCTATC AGCTAAAATC CCAGCAAAAC GGCGCTGTTG ATCCGTCAAA ATTTACGTTT ACTCCGCCGC AAGGGGTAAC GATAGACGAC CAACGTAAGT AG
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Protein sequence | MKKMAIACAL LSSVVASSVW ADAASSLKSR LDKVSSFHAT FTQKVTDGSG AAVQEGQGDL WVKRPNLFNW HMTQPDESIL VSDGKTLWFY NPFVEQATAT WLKDATGNTP FMLIARNQAS DWQQYNIKQD GDNFVLTPKA SNGNLKQFTI NVGRDGTIHQ FSAVEQDDQR SAYQLKSQQN GAVDPSKFTF TPPQGVTIDD QRK
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