Gene SeD_A1017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1017 
Symbol 
ID6874435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1008439 
End bp1009299 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content56% 
IMG OID642784202 
Productpirin protein 
Protein accessionYP_002214876 
Protein GI198244505 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA TTACAGGCGT CTATACCGCA CCTCGCCCGC ACTGGGTTGG CGATGGATTT 
CCGGTTCGTT CACTCTTTTC TTATCAGTCA CATGCGCAGC AGTTGAGTCC CTTCCTGCTG 
CTGGATTATG CCGGGCCGCA CACATTTACG CCGGGTAATG AAAAACGCGG CGTTGGGGAG 
CATCCACACC GCGGTTTCGA GACCGTGACG ATTGTTTATA GTGGCGAAGT CGAGCATCGG 
GACTCTACCG GTCGCGGCGG CGTTATCGGC CCGGGCGACG TTCAGTGGAT GACCGCAGGC 
GCAGGCATTT TGCATGAAGA GTTCCATTCC GACGCGTTTA CCCGTCGGGG CGGCGAACTG 
GAAATGGTGC AGTTGTGGGT TAACCTTCCA ATGAAGGACA AAATGACCAC CCCGGGTTAT 
CAAAGCATTA CCCACGATGT TATCCCGACC GTTACGTTAC CGGATGACGC CGGAGTCGTG 
CGGGTCATTG CAGGGCGTTA TGAAGAGACA AAAGGCCCGG CGCACACTTT CTCGCCGCTC 
AATGTCTGGG ATATGCGCCT GCAACGCAAT CGCCAGCTTA CATTGGCACA GCCGGAAGGA 
TGGAGCACCG CGCTGGTGGT ACTGAAAGGC AATATCACGG TGAACGGCAC GACGCCGGTC 
AACGAAGCGC AACTGGTGGT ATTGAGCCAG CAAGGGAAAA CGCTGCACCT TGAGGCCAGC 
AGCGACGCCA GCGTATTGCT GTTATCAGGC GAGCCGCTGA ATGAACCGAT TGTGGGTTAC 
GGCCCATTTG TTATGAACAC GAAACAAGAG ATCGCAGAAG CAGTCCGCGA TTTCAACTCC 
GGCCGTTTTG GCCAAATCTG A
 
Protein sequence
MKQITGVYTA PRPHWVGDGF PVRSLFSYQS HAQQLSPFLL LDYAGPHTFT PGNEKRGVGE 
HPHRGFETVT IVYSGEVEHR DSTGRGGVIG PGDVQWMTAG AGILHEEFHS DAFTRRGGEL 
EMVQLWVNLP MKDKMTTPGY QSITHDVIPT VTLPDDAGVV RVIAGRYEET KGPAHTFSPL 
NVWDMRLQRN RQLTLAQPEG WSTALVVLKG NITVNGTTPV NEAQLVVLSQ QGKTLHLEAS 
SDASVLLLSG EPLNEPIVGY GPFVMNTKQE IAEAVRDFNS GRFGQI