Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0950 |
Symbol | |
ID | 6873891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 944125 |
End bp | 945663 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642784139 |
Product | glutathione-binding protein GsiB |
Protein accession | YP_002214814 |
Protein GI | 198243736 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.981703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAT TTATTACGCA TAAATGGCTG GCGGCGCTGG GACTGGCCTC ATCCATTGCG GCTTTTCCGG CCCTGGCGGC CAAAGATGTG GTGGTGGCGG TAGGGTCTAA TTTCACCACG CTCGATCCGT ATGACGCCAA CGATACGCTC TCGCAGGCGG TGGCGAAGTC ATTTTATCAG GGGCTGTTTG GCCTGGATAA AGACATGAAG GTAAAAAACG TCCTGGCGAA AGGCTATACC GTTTCTGATG ACGGTCTGAC CTACACCATT ACCCTACGGC AGGGGGTGAA ATTTCAGGAC GGCGCGGATT TTGATGCGGC GGCGGTGAAA GCGAATCTCG ATCGCGCCAG CAATCCGGAT AACCACCTCA AGCGTTATAA CCTGTATAAA AATATCGCAA AAACGGAGGT CGTCGATCCG GCAACGGTAA AAATTACCCT GAAACAGCCG TTCTCCGCTT TCATTAATAT TCTGGCGCAC CCGGCGACGG CGATGATCTC GCCGCAAGCG CTGGAAAAAT ATGGCAAGGA TATTGGTTTT CATCCGGTCG GTACCGGTCC ATACCAGCTT GAAACCTGGA ATCAGACCGA CTTTGTCAAA GTGAAGAAGT TCGCCGGTTA CTGGCAGCAG GGCTTACCCA AGCTGGATTC TATTACCTGG CGTCCGGTTA CTGACAACAA TACCCGCGCG GCGATGCTGC AAACCGGCGA AGCGCAATTT GCTTTTCCTA TCCCTTATGA GCAGGCCGCG TTATTGGCGA AAAATAAAAA CCTCGAACTG GTCGCCAGCC CGTCCATTAT GCAGCGTTAT ATCAGTATGA ATGTGACGCA GAAGCCGTTT GATAATCCTA AGGTGCGTGA GGCGTTGAAT TACGCTATCA ATCGTCAGGC GCTGGTTAAA GTGGCGTTTG CCGGATACGC CACGCCGGCG ACGGGCGTGG TGCCGCCGTC GATAGCCTAT GCGCAAAGCT ATCAGCCATG GCCCTATGAT CCGGCTAAAG CGCGCGAACT GTTGAAAGAG GCGGGGTATC CAGACGGTTT CAGTACCACG CTGTGGTCAT CGCACAACCA TAGCACCGCG CAAAAAGTGT TGCAGTTTAC CCAACAGCAA CTGGCGCAGA TTGGCGTTAA AGCCCGGATA ACCGCGATGG ACGCCGGCCA GCGCGCCGCG GAAGTCGAGG GCAAAGGGCA AAAAGAGAGC GGCGTGCGAA TGTTCTATAC AGGCTGGTCG GCGTCGACGG GCGAAGCTGA CTGGGCGTTA TCGCCGCTCT TCGCATCACA AAACTGGCCG CCGACGCAGT TTAATACCGC TTTTTACAGC AACAAGCAGG TCGACAGCGA TTTGGCGGCG GCCTTAAAGA CCAACGATCC GCAGGAGAAA ACACGATTGT ACAAAGAGGC GCAGGATATT ATCTGGAAAG AGTCGCCCTG GATACCGTTG GTGGTGGAGA AATTGGTTTC TGCGCACAGT AAAAATTTGA CCGGTTTCTG GATTATGCCG GATACCGGTT TCAGCTTTGA CGATGCGGAT TTGAAGTAA
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Protein sequence | MTQFITHKWL AALGLASSIA AFPALAAKDV VVAVGSNFTT LDPYDANDTL SQAVAKSFYQ GLFGLDKDMK VKNVLAKGYT VSDDGLTYTI TLRQGVKFQD GADFDAAAVK ANLDRASNPD NHLKRYNLYK NIAKTEVVDP ATVKITLKQP FSAFINILAH PATAMISPQA LEKYGKDIGF HPVGTGPYQL ETWNQTDFVK VKKFAGYWQQ GLPKLDSITW RPVTDNNTRA AMLQTGEAQF AFPIPYEQAA LLAKNKNLEL VASPSIMQRY ISMNVTQKPF DNPKVREALN YAINRQALVK VAFAGYATPA TGVVPPSIAY AQSYQPWPYD PAKARELLKE AGYPDGFSTT LWSSHNHSTA QKVLQFTQQQ LAQIGVKARI TAMDAGQRAA EVEGKGQKES GVRMFYTGWS ASTGEADWAL SPLFASQNWP PTQFNTAFYS NKQVDSDLAA ALKTNDPQEK TRLYKEAQDI IWKESPWIPL VVEKLVSAHS KNLTGFWIMP DTGFSFDDAD LK
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