| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0930 |
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| Symbol | |
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| ID | 6874801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 924229 |
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| End bp | 925809 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642784123 |
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| Product | inner membrane protein YbiP |
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| Protein accession | YP_002214798 |
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| Protein GI | 198245829 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAA CCCTTATCGA TTCACTTCTC GCCCGTCGTC GGGCTGTAAG CCCGTGGGCG
GGCCTCTACT TTTTACAGTC GCTGCTGATT AACCTCGCGC TCGGCTATCC CTTTAGCCTG
CTTTATACCG CGGCGTTTAC CTGCCTGTTG CTGTTGCTCT GGCGCTACCT GCCCCGCGGA
CAAAAAGCGC TGCTCGGCAT CTGTTCGCTG GTAGCTGCTT GCTATTTTCC CTTTGGCCAG
GCTTACGGCG CGCCGAACTT TAATACGCTG CTGGCGCTGC ACTCCACCAA TATGGAAGAG
TCGAGCGAAA TCCTGACCAT CTTCCCGTGG TATAGCTACC TGACCGGACT TTTTATTTTT
GCGCTGGGTA TTATTGCGCT TCGCCGCCGA AAAGAAGAGG TCAAGCCGCG CTGGAATAGC
CTCGACAGCC TGTGCCTGCT GATTAGCGTC GCGGCATTTT TCGTCGCGCC GGTACAAAAT
CTGGCGTGGG GCGGCGTTTT TAAGGTTATT GATACCGGCT ATCCGGTTTT TCGCTTCGCC
AAAGACGTTA TCGTCAATAA CAACGAAGTC ATTGAAGAGC AGCACCGTAT GGCGCAGCTA
TCCGGCATAA AAGATAGCTG GACGGTTACT GCGGTGAAAC CCAGATATCA CATCTATGTC
GTGGTGATTG GTGAAAGCGC GCGACGGGAT GCCATGGGCG CTTTCGGCGG CCACTGGGAT
AATACCCCCT TCGCCAGCCA TGTGAATGGC GACTTCTTTA TGGATTACAT CGCCGCCAGC
GGCTCAACGC AAAAATCGCT TGGTTTAACG CTCAATCGCG TGGTGGATAA CAAACCGCAG
TATCAGGATA ACTTCGTCAC GCTGGCTAAC CGCGCCGGTT TTCAGACATG GTGGTTTTCC
AATCAGGGGC AAATTGGCGA ATACGACACG GCCATCGCCA GTATCGCCAA ACGCGCCGAT
GAAGCGCATT TCCTGAAAAA CGGCGATTTT GAAGCGGATA AAAATACTCG CGACGACGCG
CTGTTAACCA TGACGGCGCA GGTATTGGCG ACAGAACGCA CGCAACCGCA GTTGATTGTG
TTGCATTTAA TGGGATCGCA TCCCCAGGCC TGCGACCGTA CTCAGGGAAA ATACGCGACG
TTTGTCCAGT CGAAAGAGAC GTCTTGTTAT TTATACACCA TGACGCAAAC CGACGATTTG
CTCCGTCAGC TCTATACTCA GCTTCGTCAT AGCGGCGACA GTTTTTCGCT CGTCTATTTC
TCCGATCACG GGCTGGCGTT TAAAGAGCGC GGCAAAGCGG TACAGTACCT GGCGCATGAC
GACAAATTCC AGCAAAACTT CCAGGTGCCG TTTATGGTGC TATCCAGCGA CAGTAAAGCG
CATCGGATCA TTAAAGCTCG CCGTTCCGCG AACGATTTCC TGAGTTTTTT CTCGCAATGG
ACAGGAATTA GCGCTAAAGA GATCAAAAAT CGCTATCGAT TTATTTCGGA ACAGAAAGCC
GGGCCCGTTT ATATCACCAA TTTCAAATTA CAGAAAGTGG ACTATAACCA TCTGGGCAGC
GATATTTTTT CACTAAAATA A
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| Protein sequence | MNSTLIDSLL ARRRAVSPWA GLYFLQSLLI NLALGYPFSL LYTAAFTCLL LLLWRYLPRG
QKALLGICSL VAACYFPFGQ AYGAPNFNTL LALHSTNMEE SSEILTIFPW YSYLTGLFIF
ALGIIALRRR KEEVKPRWNS LDSLCLLISV AAFFVAPVQN LAWGGVFKVI DTGYPVFRFA
KDVIVNNNEV IEEQHRMAQL SGIKDSWTVT AVKPRYHIYV VVIGESARRD AMGAFGGHWD
NTPFASHVNG DFFMDYIAAS GSTQKSLGLT LNRVVDNKPQ YQDNFVTLAN RAGFQTWWFS
NQGQIGEYDT AIASIAKRAD EAHFLKNGDF EADKNTRDDA LLTMTAQVLA TERTQPQLIV
LHLMGSHPQA CDRTQGKYAT FVQSKETSCY LYTMTQTDDL LRQLYTQLRH SGDSFSLVYF
SDHGLAFKER GKAVQYLAHD DKFQQNFQVP FMVLSSDSKA HRIIKARRSA NDFLSFFSQW
TGISAKEIKN RYRFISEQKA GPVYITNFKL QKVDYNHLGS DIFSLK
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