Gene SeD_A0929 details

Gene Information

• Locus tag: SeD_A0929
• Symbol: ompX
• ID: 6874592
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: +
• Start bp: 923652
• End bp: 924167
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 642784122
• Product: outer membrane protein X
• Protein accession: YP_002214797
• Protein GI: 198245355
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3637] Opacity protein and related surface antigens
• TIGRFAM ID: [TIGR03304] outer membrane insertion C-terminal signal

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 87
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAAAAA TTGCATGTCT TTCAGCACTG GCCGCTGTTC TGGCTTTTTC CGCAGGTACT 
GCAGTAGCTG CTACTTCTAC CGTTACCGGT GGTTACGCTC AGAGCGACGC GCAGGGCGTA 
GCGAATAAAA TGAGCGGTTT CAACCTGAAG TATCGTTACG AGCAGGACGA CAACCCGCTG 
GGCGTAATCG GTTCCTTCAC CTACACCGAA AAAGATCGTA CTAACGGTGC GGGCGATTAC 
AACAAAGGTC AGTACTACGG CATCACTGCC GGCCCGGCTT ACCGTCTGAA CGATTGGGCG 
AGCATCTACG GTGTAGTCGG TGTGGGTTAC GGTAAATTCC AGACGACCGA TTACCCAACC 
TACAAACATG ACACCAGCGA TTATGGCTTC TCCTATGGCG CTGGTCTGCA ATTCAACCCG 
ATGGAAAATG TTGCTCTGGA CTTCTCTTAC GAGCAGAGCC GTATTCGTAG CGTTGACGTT 
CGCACCTGGA TTGCTGGCGT GGGTTACCGC TTCTAA 

 

Protein sequence

MKKIACLSAL AAVLAFSAGT AVAATSTVTG GYAQSDAQGV ANKMSGFNLK YRYEQDDNPL 
GVIGSFTYTE KDRTNGAGDY NKGQYYGITA GPAYRLNDWA SIYGVVGVGY GKFQTTDYPT 
YKHDTSDYGF SYGAGLQFNP MENVALDFSY EQSRIRSVDV RTWIAGVGYR F