Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0912 |
Symbol | |
ID | 6872525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 906106 |
End bp | 907842 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642784105 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_002214780 |
Protein GI | 198242682 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGG CCGTTATTAC GCTGCACGGT CTGACGAAGC GCTTTGCGGG AATGGATAAA CCCGCCGTCG CGCCGCTCGA CTGTACCATT CATTCCGGTT ATGTCACCGG GCTGGTAGGG CCGGACGGCG CAGGAAAAAC CACGCTGATG CGTATGCTGG CGGGCCTGCT CAAAGCCGAT GGCGGCAACG CGTCAGTATT GGGCTTCGAC CCGATACAAA ACGACAGCGA GCTGCACGCG GTTCTGGGCT ATATGCCGCA GAAATTCGGT CTGTATGAAG ATCTTACCGT CATGGAGAAC CTTAATCTCT ATGCCGATTT ACGCAGCGTT ACCGGCGAGA TACGGGAAAA GACCTTTGCC CGTTTGTTGG AGTTTACCGC CCTCGGCCCT TTCACTGGCC GTCTGGCAGG AAAATTGTCC GGCGGGATGA AGCAAAAACT GGGGCTGGCC TGTACGCTGG TCGGCGAACC GAAAGTGCTG CTGTTGGATG AACCGGGCGT TGGCGTTGAC CCGATTTCAC GGCGCGAGTT GTGGCAAATG GTCCACGAAC TGGCGGGCGA CGGGATGCTG ATTTTATGGA GCACCTCCTA TCTGGATGAA GCCGAACAGT GCCGCGATGT GCTGCTGATG AATGAAGGCG AGCTGCTCTA TCAGGGCGAA CCTAAAGCGC TGACGCAAAC GATGGCCGGT CGTAGCTTTC TGATGAGCAG TCCACAGGAA AACAACCGTA AGTTACTACA GAGAGCGCTC AGACTGCCGC AGGTGAGCGA CGGCATGATT CAGGGGCGTT CGGTACGCCT GATCCTGAAA AAAGAGGCGA CCGCAGCAGA TATTCGTCAG GCCGAAGGAA TGCCGGAAAT CACCCTCAAT GAGACCGCGC CGCGCTTCGA AGATGCGTTT ATCGATCTGC TTGGCGGAGC GGGAACCTCG GAGTCTCCGC TGGGTTCAAT CCTGCATACG GTTGAAGGCA CTGCCGGCGA AACGGTGATT GAAGCGCAGG AACTGACGAA AAAATTTGGC GATTTCGCGG CCACGGACCA TGTTAATTTC GTCGTACAAC GCGGCGAGAT TTTTGGCCTG CTCGGCCCGA ACGGCGCGGG TAAATCAACC ACCTTTAAAA TGATGTGCGG CCTGCTGGTG CCGACGTCCG GCAAGGCGCT GGTGCTGGAT ATGGACCTGA AAGTCAGCTC CGGCAAAGCC CGTCAGCATC TGGGCTATAT GGCGCAAAAA TTTTCGCTTT ACGGCAACCT GACGGTTGAG CAGAACCTGC GTTTTTTCTC CGGCGTCTAC GGTTTGCGGG GCCGCGCGCA AAATGAAAAA ATTCAGCGCA TGAGTGAAGC GTTTGGTCTG AAAAGCATCG CGTCGCATCC CTCCGATGCG CTGCCGCTGG GCTTTAAACA GCGACTGGCG CTGGCCTGCT CGCTGATGCA CGAACCGGAT ATTTTATTCC TTGATGAACC AACGTCCGGG GTTGATCCCC TCACCCGTCG TGAATTTTGG CTGCACATTA ATAGCATGGT GGAAAAAGGG GTCACGGTAA TGGTGACGAC CCACTTTATG GATGAGGCGG AATATTGCGA TCGCATCGGA CTGGTTTATC GCGGGAAGCT TATCGCCAGC GGTACGCCGG ACGATCTCAA AGCGCAGGCC GCCGATGAGC AACAGGCCGA TCCAACGATG GAGCAGGCCT TTATCACTCT CATCAATGAC TGGGATAAGG AGCATACGCA TGAGTAA
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Protein sequence | MSEAVITLHG LTKRFAGMDK PAVAPLDCTI HSGYVTGLVG PDGAGKTTLM RMLAGLLKAD GGNASVLGFD PIQNDSELHA VLGYMPQKFG LYEDLTVMEN LNLYADLRSV TGEIREKTFA RLLEFTALGP FTGRLAGKLS GGMKQKLGLA CTLVGEPKVL LLDEPGVGVD PISRRELWQM VHELAGDGML ILWSTSYLDE AEQCRDVLLM NEGELLYQGE PKALTQTMAG RSFLMSSPQE NNRKLLQRAL RLPQVSDGMI QGRSVRLILK KEATAADIRQ AEGMPEITLN ETAPRFEDAF IDLLGGAGTS ESPLGSILHT VEGTAGETVI EAQELTKKFG DFAATDHVNF VVQRGEIFGL LGPNGAGKST TFKMMCGLLV PTSGKALVLD MDLKVSSGKA RQHLGYMAQK FSLYGNLTVE QNLRFFSGVY GLRGRAQNEK IQRMSEAFGL KSIASHPSDA LPLGFKQRLA LACSLMHEPD ILFLDEPTSG VDPLTRREFW LHINSMVEKG VTVMVTTHFM DEAEYCDRIG LVYRGKLIAS GTPDDLKAQA ADEQQADPTM EQAFITLIND WDKEHTHE
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