Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0862 |
Symbol | oadA |
ID | 6875339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 854315 |
End bp | 856087 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642784057 |
Product | oxaloacetate decarboxylase |
Protein accession | YP_002214732 |
Protein GI | 198245397 |
COG category | [C] Energy production and conversion |
COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTG CCATTACCGA CGTCGTCCTG CGTGACGCCC ACCAGTCCCT TTTCGCCACC CGTCTGCGCC TTGACGATAT GCTGCCGATT GCCGCCGCGC TCGACGACGT GGGCTACGGG TCGCTGGAGT GCTGGGGCGG CGCCACCTTT GACGCCTGTA TCCGCTTTCT CGGCGAAGAC CCGTGGGTCC GCCTGCGCGA ACTCAAAAAA GCCATGCCCA AAACCCCGCT GCAGATGCTG CTGCGCGGCC AGAACCTGCT CGGCTACCGC CACTACGCCG ATGATGTGGT GGAACGCTTC GTTGAGCGGG CGGTGAAAAA CGGCATGGAC GTGTTCCGCG TCTTCGATGC CATGAACGAC CCGCGCAATA TGAAGGCCGC CCTGCAGGCG GTGCGCAGCC ACGGCGCGCA CGCCCAGGGC ACGCTGAGCT ATACCACCAG CCCGGCGCAC ACCCTGCAGA CCTGGCTGGA TTTAACGGAG CAACTGCTGG AAACCGGCGT TGACTCGATT GCCATCAAGG ATATGTCCGG CATTCTCACG CCGATGGCGG CGTATGAGCT GGTCAGCGAA ATCAAAAAAC GTTTTGAGGT GCGCCTGCAC CTGCACTGTC ACGCCACCAC CGGGATGGCG GAGATGGCCC TGCTGAAGGC TATCGAGGCG GGTGTTGACG GCGTGGACAC GGCGATTTCC TCCATGAGCG CCACCTACGG CCACCCGGCC ACCGAGGCGC TGGTGGCGAC GTTGGCAGGT ACTGAGCACG ACACCGGGCT GGATATCCTG AAGCTGGAAA ACATCGCCGC CTACTTCCGC GAGGTGCGCA AAAAGTATCA CGCCTTTGAA GGCCAGCTGA AGGGCTACGA CAGCCGTATT CTGGTGGCCC AGGTACCGGG CGGAATGCTC ACCAACCTCG AAAGCCAGCT GAAGCAGCAG AACGCGGCGG ACAAACTCGA CCAGGTGCTG GCGGAAATCC CCCGCGTGCG CGAGGACCTC GGCTTTATCC CGCTGGTGAC CCCGACCTCG CAGATTGTCG GCACCCAGGC GGTGCTCAAT GTCCTGACCG GCGAGCGCTA CAAAACCATT GCCAAAGAAA CGGCGGGCAT TCTGAAAGGC GAATACGGCC ACACCCCGGT GCCGGTGAAC GCCGCGTTAC AGGCCCGCGT GCTGGAAGGG GGCGCTCCGG TGACCTGCCG CCCGGCGGAC CTGCTGAAGC CGGAACTGGC TGAACTGGAA GCGGACGTCA GGCGCCAGGC GCAGGAGAAG GGCATTCAGC TTGCGGGAAA CGCCATCGAC GACGTGCTCA CCGTGGCGCT GTTCCCGCAG ATTGGCCTCA AATTCCTCGA AAACCGCCAC AACCCGGCGG CGTTTGAGCC GGTACCGCAG GCGGAAGCCG CGCAGCCGGT GGCAAAAGCA GAGAAGCCTG CCGCTTCCGG TATCTACACC GTGGAAGTGG AAGGCAAAGC CTTTGTGGTG AAGGTCAGCG ACGGCGGCGA TATCAGCCAG CTGACGGCGG CTTCGTCTGC GCCGGTTCAG GCGGCATCCC CGGTTGCCCC GGCAGGCGCC GGCACCCCGG TCACCGCGCC GCTGGCGGGC AACATCTGGA AGGTGATTGC CACCGAGGGC CAGAGCGTGG CCGAAGGCGA CGTGCTGCTG ATTCTGGAAG CCATGAAGAT GGAAACCGAA ATCCGCGCCG CGCAGGCCGG GACGGTACGC GGTATCGCGG TGAAGTCCGG GGACGCGGTT TCCGTGGGCG ACACCCTGAT GACGCTGGCG TAA
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Protein sequence | MTIAITDVVL RDAHQSLFAT RLRLDDMLPI AAALDDVGYG SLECWGGATF DACIRFLGED PWVRLRELKK AMPKTPLQML LRGQNLLGYR HYADDVVERF VERAVKNGMD VFRVFDAMND PRNMKAALQA VRSHGAHAQG TLSYTTSPAH TLQTWLDLTE QLLETGVDSI AIKDMSGILT PMAAYELVSE IKKRFEVRLH LHCHATTGMA EMALLKAIEA GVDGVDTAIS SMSATYGHPA TEALVATLAG TEHDTGLDIL KLENIAAYFR EVRKKYHAFE GQLKGYDSRI LVAQVPGGML TNLESQLKQQ NAADKLDQVL AEIPRVREDL GFIPLVTPTS QIVGTQAVLN VLTGERYKTI AKETAGILKG EYGHTPVPVN AALQARVLEG GAPVTCRPAD LLKPELAELE ADVRRQAQEK GIQLAGNAID DVLTVALFPQ IGLKFLENRH NPAAFEPVPQ AEAAQPVAKA EKPAASGIYT VEVEGKAFVV KVSDGGDISQ LTAASSAPVQ AASPVAPAGA GTPVTAPLAG NIWKVIATEG QSVAEGDVLL ILEAMKMETE IRAAQAGTVR GIAVKSGDAV SVGDTLMTLA
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