Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0857 |
Symbol | |
ID | 6874199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 849661 |
End bp | 850542 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642784052 |
Product | fumarate hydratase |
Protein accession | YP_002214727 |
Protein GI | 198244634 |
COG category | [C] Energy production and conversion |
COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0293622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAA CAATGCAACA TAGCACTGGA GGGAGTATGA GTCGTATATT AAATACAGAA ATTATCATTT CGGTTATCGA AAAACTTGTA AAAAAAGCTT GTTATGAACT GGATGATAAT CTCATGTGTT CTTTTCGTAA AGCATATGAT AAAGAAGAGT CAAAGATCGG CAAGGAAACC ATTAAGATAT TAATTGATAA TGGAGAGTAT GCAAAAAAAG AACAACTTGC ATGCTGCCAT GATACCGGCA CTTGTATCGT TATAATGGAA ATTGGACAAC ATGTATGCTG GGAAGGTAAG CCGCTTAAAG ATCAGGTGAA CCAGGGTGTT CGCCAGGGCT ATGAAAATGG ATACTTAAGA AAATCCATGG TTGCAGATCC ATTAGAACGT ATTAATACTA ATGATAATAC TCCTGCAATT TTACATACTG AAATTGTTGA TGGTGACCGA GTGACAATTA CCGTTATGCC AAAGGGCGGC GGTAGCGAAA ATATGGGAAC TTTTAAAACA TTGCTTCCCG GCGATGGTAT TGATGGTATA AAAGATTTTG TTCTGGAAAC TGTCCGTCGT GTAGGAGGCA ATCCATGCCC TCCTTATATT ATTGGTATCG GCGTTGGCGG TACAATGGAT CACTGTTCGT GGATGGCTAA GAAAGCATTA TTACGCCCTC TTGGTGAGTT CAATGCTAAA CCACTTTATG CCCAGCTCGA AGCTGAATTA TTAGAGGCCG TGAATAATAC AGGGATCGGC CCTTTAGGTA TGGGCGGGCG TATTACGGCG TTAGGCGTGC ATGTCGATTA CTATCCTTGC CATATCACTG CACTGCCAGT CGCAATCAAT TTCCAATGTA ATGCAAGCCG CCACGCTAGT GAAATCATTT AA
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Protein sequence | MDKTMQHSTG GSMSRILNTE IIISVIEKLV KKACYELDDN LMCSFRKAYD KEESKIGKET IKILIDNGEY AKKEQLACCH DTGTCIVIME IGQHVCWEGK PLKDQVNQGV RQGYENGYLR KSMVADPLER INTNDNTPAI LHTEIVDGDR VTITVMPKGG GSENMGTFKT LLPGDGIDGI KDFVLETVRR VGGNPCPPYI IGIGVGGTMD HCSWMAKKAL LRPLGEFNAK PLYAQLEAEL LEAVNNTGIG PLGMGGRITA LGVHVDYYPC HITALPVAIN FQCNASRHAS EII
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