Gene SeD_A0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0857 
Symbol 
ID6874199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp849661 
End bp850542 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content41% 
IMG OID642784052 
Productfumarate hydratase 
Protein accessionYP_002214727 
Protein GI198244634 
COG category[C] Energy production and conversion 
COG ID[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 
TIGRFAM ID[TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0293622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAA CAATGCAACA TAGCACTGGA GGGAGTATGA GTCGTATATT AAATACAGAA 
ATTATCATTT CGGTTATCGA AAAACTTGTA AAAAAAGCTT GTTATGAACT GGATGATAAT
CTCATGTGTT CTTTTCGTAA AGCATATGAT AAAGAAGAGT CAAAGATCGG CAAGGAAACC
ATTAAGATAT TAATTGATAA TGGAGAGTAT GCAAAAAAAG AACAACTTGC ATGCTGCCAT
GATACCGGCA CTTGTATCGT TATAATGGAA ATTGGACAAC ATGTATGCTG GGAAGGTAAG
CCGCTTAAAG ATCAGGTGAA CCAGGGTGTT CGCCAGGGCT ATGAAAATGG ATACTTAAGA
AAATCCATGG TTGCAGATCC ATTAGAACGT ATTAATACTA ATGATAATAC TCCTGCAATT
TTACATACTG AAATTGTTGA TGGTGACCGA GTGACAATTA CCGTTATGCC AAAGGGCGGC
GGTAGCGAAA ATATGGGAAC TTTTAAAACA TTGCTTCCCG GCGATGGTAT TGATGGTATA
AAAGATTTTG TTCTGGAAAC TGTCCGTCGT GTAGGAGGCA ATCCATGCCC TCCTTATATT
ATTGGTATCG GCGTTGGCGG TACAATGGAT CACTGTTCGT GGATGGCTAA GAAAGCATTA
TTACGCCCTC TTGGTGAGTT CAATGCTAAA CCACTTTATG CCCAGCTCGA AGCTGAATTA
TTAGAGGCCG TGAATAATAC AGGGATCGGC CCTTTAGGTA TGGGCGGGCG TATTACGGCG
TTAGGCGTGC ATGTCGATTA CTATCCTTGC CATATCACTG CACTGCCAGT CGCAATCAAT
TTCCAATGTA ATGCAAGCCG CCACGCTAGT GAAATCATTT AA
 
Protein sequence
MDKTMQHSTG GSMSRILNTE IIISVIEKLV KKACYELDDN LMCSFRKAYD KEESKIGKET 
IKILIDNGEY AKKEQLACCH DTGTCIVIME IGQHVCWEGK PLKDQVNQGV RQGYENGYLR
KSMVADPLER INTNDNTPAI LHTEIVDGDR VTITVMPKGG GSENMGTFKT LLPGDGIDGI
KDFVLETVRR VGGNPCPPYI IGIGVGGTMD HCSWMAKKAL LRPLGEFNAK PLYAQLEAEL
LEAVNNTGIG PLGMGGRITA LGVHVDYYPC HITALPVAIN FQCNASRHAS EII