| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0836 |
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| Symbol | cydA |
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| ID | 6873330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 834462 |
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| End bp | 836030 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642784031 |
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| Product | cytochrome d ubiquinol oxidase, subunit I |
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| Protein accession | YP_002214710 |
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| Protein GI | 198243553 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.664102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.640825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGATA TAGTCGAACT GTCGCGCTTA CAGTTTGCCT TGACCGCGAT GTACCACTTC
CTGTTTGTGC CGCTAACGCT CGGTATGGCG TTCCTGCTGG CCATTATGGA AACGGTATAC
GTCCTTTCCG GCAAACAGAT TTATAAAGAT ATGACCAAGT TCTGGGGCAA GTTGTTTGGT
ATCAACTTTG CTCTGGGTGT GGCTACCGGT TTGACCATGG AGTTCCAGTT CGGGACAAAC
TGGTCGTACT ACTCCCACTA TGTTGGGGAC ATCTTCGGTG CGCCGCTGGC CATCGAAGGT
TTGATGGCCT TCTTCCTCGA ATCCACCTTT GTAGGTCTGT TCTTCTTCGG CTGGGATCGT
CTGAGTAAAG TTCAGCATAT GTGCGTCACC TGGCTGGTGG CTCTGGGGTC CAACCTCTCC
GCGTTGTGGA TTCTGGTAGC GAACGGCTGG ATGCAAAACC CAATCGCTGC GGATTTCAAT
TTCGAAACCA TGCGTATGGA AATGGTGAGC TTCTCTGAAC TGGTGCTGAA CCCGGTAGCA
CAGGTGAAAT TTGTTCACAC TGTGGCGTCC GGCTATGTCA CCGGCGCGAT GTTCATCCTC
GGTATCAGCG CTTACTACAT GCTGAAAGGT CGTGACTTCG CCTTTGCTAA ACGCTCCTTT
GCTATTGCTG CCAGCTTCGG TATGGCTGCC GTACTGTCCG TTATCGTACT CGGTGACGAA
TCCGGTTACG AAATGGGCGA CGTGCAGAAA ACCAAGCTCG CTGCGATTGA AGCAGAATGG
GAAACGCAAC CTGCTCCGGC CTCCTTTACC CTGTTCGGCA TTCCTGACCA GGACAAACAG
GAAAACCATC TGGCGATTCA GATCCCTTAT GCGCTCGGCA TTATCGCTAC GCGTTCCGTG
GACACGCCGG TTATTGGTCT GAAAGATCTC ATGGTTCAGC ATGAAGAGCG TATCCGTAAC
GGGATGAAAG CCTATGAACT GCTGGAGCAG CTGCGCGCCG GTTCTACCGA CCAGGCTGTT
CGCGACCAGT TTAACAGCAT GAAGAAAGAT CTCGGTTACG GCCTGCTGCT GAAACGCTAT
ACGCCTAATG TGACTGACGC GACCGAAGCG CAGATCCAGC AAGCGACGAA AGATTCCATT
CCTCGCGTTG CGCCGCTGTA CTTCGCTTTC CGTATCATGG TGGCGTGCGG CTTCCTGCTG
CTGGCGATCA TCGCACTTTC CTTCTGGAGC GTGATTCGTA ACCGCATCGG TGAGAAAAAA
TGGCTGTTGC GCGCGGCGCT GTACGGTATT CCACTGCCGT GGATTGCGGT TGAAGCAGGT
TGGTTCGTCG CCGAGTATGG TCGTCAGCCG TGGGCGATCG GCGAAGTGTT GCCGACAGCC
GTGGCGAACT CATCGCTGAC CGTGGGCGAT CTGCTGTTCT CCATGTTCCT GATTTGCGGC
CTGTATACCC TGTTCCTGGT GGCAGAATTG TTCCTGATGT TCAAATTTGC ACGCCTTGGC
CCAAGCAGCC TGAAAACCGG TCGCTATCAC TTTGAGCAGT CCACCGTGAC TTCTCAGCCG
GCACGCTAA
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| Protein sequence | MLDIVELSRL QFALTAMYHF LFVPLTLGMA FLLAIMETVY VLSGKQIYKD MTKFWGKLFG
INFALGVATG LTMEFQFGTN WSYYSHYVGD IFGAPLAIEG LMAFFLESTF VGLFFFGWDR
LSKVQHMCVT WLVALGSNLS ALWILVANGW MQNPIAADFN FETMRMEMVS FSELVLNPVA
QVKFVHTVAS GYVTGAMFIL GISAYYMLKG RDFAFAKRSF AIAASFGMAA VLSVIVLGDE
SGYEMGDVQK TKLAAIEAEW ETQPAPASFT LFGIPDQDKQ ENHLAIQIPY ALGIIATRSV
DTPVIGLKDL MVQHEERIRN GMKAYELLEQ LRAGSTDQAV RDQFNSMKKD LGYGLLLKRY
TPNVTDATEA QIQQATKDSI PRVAPLYFAF RIMVACGFLL LAIIALSFWS VIRNRIGEKK
WLLRAALYGI PLPWIAVEAG WFVAEYGRQP WAIGEVLPTA VANSSLTVGD LLFSMFLICG
LYTLFLVAEL FLMFKFARLG PSSLKTGRYH FEQSTVTSQP AR
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