Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0813 |
Symbol | kdpB |
ID | 6872403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 807907 |
End bp | 809955 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642784008 |
Product | potassium-transporting ATPase subunit B |
Protein accession | YP_002214687 |
Protein GI | 198245462 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2216] High-affinity K+ transport system, ATPase chain B |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01497] K+-transporting ATPase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.374197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCGCA AGCAACTGGC GCTGTTTGAA CCTGTTTTAC TCGTACAGGC GCTAACGGAT GCCGTAAAAA AATTAAGCCC ACGCGCCCAG TGGCGTAACC CGGTGATGTT TGTGGTCTGG GCCGGCAGCG TGCTAACCAC TCTGTTAACG CTCGCTATGG TAACAGGACA AATAGCGGGA AGCGCCTTGT TTACAGGGAT TATCAGCCTG TGGTTATGGT TCACCGTACT GTTCGCCAAT TTTGCCGAAG CGCTGGCGGA AGGCCGCAGC AAAGCCCAGG CAAACAGTCT GAAAGGGGTG AAAAAGACCG CGTTCGCTCG TCGGCTGCGC GCCCCGCGCC ATGATGCGCA GGCCGATAAC GTGCCCGCCG CTGAACTGCG AAAAGGCGAC ATTGTCCTGG TCAAAGCGGG CGATATTATT CCCTGCGACG GCGAGGTCAT CGAAGGCGGC GCGTCGGTGG ATGAAAGTGC GATTACCGGC GAATCCGCCC CGGTGATCCG CGAGTCCGGC GGCGATTTCG CCTCTGTCAC CGGCGGCACG CGAATTCTTT CCGACTGGCT GGTGATTGCC TGTAGCGTCA ATCCTGGCGA AACCTTTCTT GACCGGATGA TCGCGATGGT GGAAGGCGCG CAGCGGCGGA AAACGCCTAA CGAGATTGCC CTGACGATTT TGCTCATCGC CCTGACCATT GTCTTTTTAC TGGCGACCGC CACCCTGTGG CCCTTCTCCG CCTGGGGCGG TAATGCGGTC AGCGTCACCG TGTTGGTGGC GTTGCTGGTG TGCCTGATCC CCACCACCAT CGGCGGGCTA CTCTCCGCCA TTGGCGTAGC CGGAATGAGC CGAATGTTGG GCGCGAACGT CATCGCCACC AGCGGCCGCG CCGTAGAAGC CGCGGGCGAT GTCGACGTGC TGCTGCTGGA TAAAACCGGC ACTATCACGC TCGGCAACCG CCAGGCGTCC GATTTTATAC CCGCCCGAGG GGTGGACGAA CGCACGCTGG CTGACGCCGC GCAGCTCGCT TCGCTGGCCG ACGAAACGCC GGAAGGTCGC AGCATTGTGA TCCTCGCCAA ACAGCGCTTT AACCTGCGTG AACGCGATGT GCAGTCGCTT CATGCCACCT TTGTTCCGTT TACCGCACAA AGCCGCATGA GCGGGATTAA TATCGATAAC CGGATGATCC GTAAAGGCTC GGTGGACGCG ATTCGGCGTC ATGTCGAGAG CAATGGCGGC CATTTTCCCG CCGATGTCGA GCAAAACGTC GAGAACGTGG CGCGCCTGGG CGCGACGCCG CTGGTGGTCG TGGAGGGCGC GCGCGTACTG GGTGTTATCG CCCTCAAGGA TATCGTTAAA GGCGGTATTA AAGAACGTTT CGCCCAGCTG CGAAAGATGG GTATTAAAAC GGTGATGATC ACTGGCGATA ACCGCCTGAC GGCGGCAGCG ATTGCCGCCG AAGCCGGTGT GGACGATTTT CTTGCCGAAG CCACGCCGGA AGCCAAGCTG GCGCTGATCC GTCAATATCA GGCGGAAGGA CGGCTGGTCG CCATGACCGG CGACGGCACT AACGATGCCC CGGCGCTGGC GCAGGCTGAC GTCGCGGTGG CGATGAACTC CGGCACCCAG GCGGCGAAAG AAGCCGGTAA TATGGTGGAT CTGGACTCTA ACCCAACCAA GTTGATTGAA GTGGTGCATA TCGGTAAGCA GATGCTGATG ACGCGCGGCT CGCTCACCAC CTTCAGTATC GCGAATGATG TAGCGAAATA TTTCGCCATT ATTCCCGCCG CGTTTGCCGC TACCTATCCG CAGCTAAACG CGCTCAACGT GATGGGGCTG CATTCGCCGA ACTCCGCCAT TCTGAGCGCG GTGATCTTTA ACGCCCTGAT TATTATTTTT CTGATCCCGC TGGCATTAAA AGGCGTGAGT TATAAGCCGC TTTCCGCATC GGCCATGCTG CGCCGTAATT TATGGATCTA TGGTCTGGGT GGTCTGTTGG TGCCGTTTAT TGGTATCAAA GTGATTGATG TGCTGCTGAC CCTGCTGGGT CTGGCGTGA
|
Protein sequence | MSRKQLALFE PVLLVQALTD AVKKLSPRAQ WRNPVMFVVW AGSVLTTLLT LAMVTGQIAG SALFTGIISL WLWFTVLFAN FAEALAEGRS KAQANSLKGV KKTAFARRLR APRHDAQADN VPAAELRKGD IVLVKAGDII PCDGEVIEGG ASVDESAITG ESAPVIRESG GDFASVTGGT RILSDWLVIA CSVNPGETFL DRMIAMVEGA QRRKTPNEIA LTILLIALTI VFLLATATLW PFSAWGGNAV SVTVLVALLV CLIPTTIGGL LSAIGVAGMS RMLGANVIAT SGRAVEAAGD VDVLLLDKTG TITLGNRQAS DFIPARGVDE RTLADAAQLA SLADETPEGR SIVILAKQRF NLRERDVQSL HATFVPFTAQ SRMSGINIDN RMIRKGSVDA IRRHVESNGG HFPADVEQNV ENVARLGATP LVVVEGARVL GVIALKDIVK GGIKERFAQL RKMGIKTVMI TGDNRLTAAA IAAEAGVDDF LAEATPEAKL ALIRQYQAEG RLVAMTGDGT NDAPALAQAD VAVAMNSGTQ AAKEAGNMVD LDSNPTKLIE VVHIGKQMLM TRGSLTTFSI ANDVAKYFAI IPAAFAATYP QLNALNVMGL HSPNSAILSA VIFNALIIIF LIPLALKGVS YKPLSASAML RRNLWIYGLG GLLVPFIGIK VIDVLLTLLG LA
|
| |