Gene SeD_A0810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0810 
Symbol 
ID6874831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp803959 
End bp804636 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content56% 
IMG OID642784005 
ProductDNA-binding transcriptional activator KdpE 
Protein accessionYP_002214684 
Protein GI198244488 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAACG TTCTGATTGT TGAAGATGAA CAGGCCATCC GCCGCTTTCT GCGCGCCGCG 
CTGGAAGGCG ACGGCCTGCG CGTGTATGAA GCTGAAACAT TACAACGTGG TTTACTGGAA
GCCGCCACGC GAAAGCCCGA TCTGATTATT CTCGATCTCG GCCTGCCGGA CGGCGACGGA
ATCGATTTCA TTCGCGACCT GCGTCAGTGG AGCGCAATAC CGGTGATTGT CCTTTCCGCC
CGCAGCGAAG AAAGCGATAA GATTGCCGCG CTTGACGCCG GAGCTGATGA TTACCTGAGC
AAGCCATTCG GCATTGGCGA GTTGCAGGCG CGTTTGCGTG TCGCGCTGCG ACGGCACGCC
GCCAGCCCTA GCGCCGATCC GATCGTCCGT TTTTCCGGCG TGACGGTCGA TCTCGCCGCA
CGGTTGATCC ACCGTGGCGA CGAAGAAATC CATCTGACGC CGATTGAGTT CCGCCTGCTG
GCGGTATTAC TCAATAATAC CGGCAAAGTA TTAACCCAAC GGCAGTTATT AAACCAGGTC
TGGGGGCCTA ACGCCGTGGA GCATAGCCAC TATTTGCGCA TCTATATGGG ACATTTACGC
CAGAAACTGG AACAAGATCC CACCCGCCCA CGCCATTTTA TTACCGAAAC CGGAATTGGC
TATCGCTTTA TGCCGTGA
 
Protein sequence
MTNVLIVEDE QAIRRFLRAA LEGDGLRVYE AETLQRGLLE AATRKPDLII LDLGLPDGDG 
IDFIRDLRQW SAIPVIVLSA RSEESDKIAA LDAGADDYLS KPFGIGELQA RLRVALRRHA
ASPSADPIVR FSGVTVDLAA RLIHRGDEEI HLTPIEFRLL AVLLNNTGKV LTQRQLLNQV
WGPNAVEHSH YLRIYMGHLR QKLEQDPTRP RHFITETGIG YRFMP