Gene SeD_A0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0808 
SymbolpotE 
ID6874451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp799682 
End bp801001 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content54% 
IMG OID642784003 
Productputrescine transporter 
Protein accessionYP_002214682 
Protein GI198244561 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.210181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAC CTAAATCCAA TAAAATGGGT GTCGTGCAGC TCACAATTCT GACTATGGTC 
AACATGATGG GCTCCGGGAT CATCATGCTA CCGACCAAAC TGTCTGAAGT CGGCACGATA
TCCATTATCT CCTGGCTGGT CACCGCCGTC GGCTCGATGG CACTGGCCTG GGCGTTTGCG
AAATGCGGTA TGTTTAGCCG TAAATCCGGC GGCATGGGCG GTTACGCCGA ATATGCCTTC
GGTAAATCCG GCAACTTTAT GGCGAACTAT ACCTACGGCG TCTCGCTGCT GATCGCCAAC
GTGGCTATCG CCATCTCCGC TGTCGGCTAT GGTACCGAAC TGTTCGGCGC CGCGCTGACG
CCGCTCCAGA TCGGTCTGGC GACTATCGCC GTATTGTGGG TTTGTACCAT CGCAAACTTT
GGCGGCGCGC GTATTACCGG ACAGATCAGT AGCGTTACCG TTTGGGGCGT CATCATTCCG
GTTGTCGGCC TGTGCATCAT TGGCTGGTTC TGGTTTAGCC CCAGCATGTA CGTAGCGTCA
TGGAACCCGC ACCATGTTCC GTTCTTTAGC GCGGTCGGTT CTTCCATCGC CATGACGTTA
TGGGCATTTC TTGGACTGGA ATCCGCCTGC GCCAACGCAG ACGTGGTCGA GAATCCGGAA
AAGAACGTCC CCATCGCGGT ACTGGGCGGT ACGCTGGGCG CGGCGGTCAT CTATATCGTT
TCGACTAACG TGATTGCCGG GATTGTGCCG AACATGGATC TGGCGAACTC CACGGCGCCG
TTTGGTCTGG CGTTTGCACA GATGTTCACG CCTGCGGTAG GTAAAGTGAT CATGGCGCTG
ATGGTAATGT CCTGCTGCGG CTCGCTGCTG GGCTGGCAGT TCACTATCGC CCAGGTATTT
AAATCCTCCG CTGACGAAGG CTATTTCCCG AAAGTCTTCT CTCGTGTAAC GAAAGTCGAC
GCGCCGGTAC AGGGGATGCT GATTATTGTG ATTATTCAGA CTGGCCTGTC GCTGATGACC
ATTAGCCCGT CGCTGAATAG TCAGTTTAAC GTCCTGGTTA ACCTGGCGGT GGTGACGAAC
ATTATTCCGT ATATTCTGTC GATGGCCGCG CTGGTTATCA TTCAGAAAAT GGCGAATGTG
CCGTCATCAA AAGCGAAAGT CGCTAACTTC GTGGCCTTCG TTGGCGCCAT GTATAGCTTC
TACGCGCTCT ATTCCTCCGG TGAAGAAGCC ATGCTGTACG GCTCAATTGT GACCTTCCTC
GGCTGGACGT TATACGGCCT GGTCTCACCG CGTTTTGAAT TGAAAAATAA ACACGGCTGA
 
Protein sequence
MSKPKSNKMG VVQLTILTMV NMMGSGIIML PTKLSEVGTI SIISWLVTAV GSMALAWAFA 
KCGMFSRKSG GMGGYAEYAF GKSGNFMANY TYGVSLLIAN VAIAISAVGY GTELFGAALT
PLQIGLATIA VLWVCTIANF GGARITGQIS SVTVWGVIIP VVGLCIIGWF WFSPSMYVAS
WNPHHVPFFS AVGSSIAMTL WAFLGLESAC ANADVVENPE KNVPIAVLGG TLGAAVIYIV
STNVIAGIVP NMDLANSTAP FGLAFAQMFT PAVGKVIMAL MVMSCCGSLL GWQFTIAQVF
KSSADEGYFP KVFSRVTKVD APVQGMLIIV IIQTGLSLMT ISPSLNSQFN VLVNLAVVTN
IIPYILSMAA LVIIQKMANV PSSKAKVANF VAFVGAMYSF YALYSSGEEA MLYGSIVTFL
GWTLYGLVSP RFELKNKHG