Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0808 |
Symbol | potE |
ID | 6874451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 799682 |
End bp | 801001 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642784003 |
Product | putrescine transporter |
Protein accession | YP_002214682 |
Protein GI | 198244561 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.210181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAC CTAAATCCAA TAAAATGGGT GTCGTGCAGC TCACAATTCT GACTATGGTC AACATGATGG GCTCCGGGAT CATCATGCTA CCGACCAAAC TGTCTGAAGT CGGCACGATA TCCATTATCT CCTGGCTGGT CACCGCCGTC GGCTCGATGG CACTGGCCTG GGCGTTTGCG AAATGCGGTA TGTTTAGCCG TAAATCCGGC GGCATGGGCG GTTACGCCGA ATATGCCTTC GGTAAATCCG GCAACTTTAT GGCGAACTAT ACCTACGGCG TCTCGCTGCT GATCGCCAAC GTGGCTATCG CCATCTCCGC TGTCGGCTAT GGTACCGAAC TGTTCGGCGC CGCGCTGACG CCGCTCCAGA TCGGTCTGGC GACTATCGCC GTATTGTGGG TTTGTACCAT CGCAAACTTT GGCGGCGCGC GTATTACCGG ACAGATCAGT AGCGTTACCG TTTGGGGCGT CATCATTCCG GTTGTCGGCC TGTGCATCAT TGGCTGGTTC TGGTTTAGCC CCAGCATGTA CGTAGCGTCA TGGAACCCGC ACCATGTTCC GTTCTTTAGC GCGGTCGGTT CTTCCATCGC CATGACGTTA TGGGCATTTC TTGGACTGGA ATCCGCCTGC GCCAACGCAG ACGTGGTCGA GAATCCGGAA AAGAACGTCC CCATCGCGGT ACTGGGCGGT ACGCTGGGCG CGGCGGTCAT CTATATCGTT TCGACTAACG TGATTGCCGG GATTGTGCCG AACATGGATC TGGCGAACTC CACGGCGCCG TTTGGTCTGG CGTTTGCACA GATGTTCACG CCTGCGGTAG GTAAAGTGAT CATGGCGCTG ATGGTAATGT CCTGCTGCGG CTCGCTGCTG GGCTGGCAGT TCACTATCGC CCAGGTATTT AAATCCTCCG CTGACGAAGG CTATTTCCCG AAAGTCTTCT CTCGTGTAAC GAAAGTCGAC GCGCCGGTAC AGGGGATGCT GATTATTGTG ATTATTCAGA CTGGCCTGTC GCTGATGACC ATTAGCCCGT CGCTGAATAG TCAGTTTAAC GTCCTGGTTA ACCTGGCGGT GGTGACGAAC ATTATTCCGT ATATTCTGTC GATGGCCGCG CTGGTTATCA TTCAGAAAAT GGCGAATGTG CCGTCATCAA AAGCGAAAGT CGCTAACTTC GTGGCCTTCG TTGGCGCCAT GTATAGCTTC TACGCGCTCT ATTCCTCCGG TGAAGAAGCC ATGCTGTACG GCTCAATTGT GACCTTCCTC GGCTGGACGT TATACGGCCT GGTCTCACCG CGTTTTGAAT TGAAAAATAA ACACGGCTGA
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Protein sequence | MSKPKSNKMG VVQLTILTMV NMMGSGIIML PTKLSEVGTI SIISWLVTAV GSMALAWAFA KCGMFSRKSG GMGGYAEYAF GKSGNFMANY TYGVSLLIAN VAIAISAVGY GTELFGAALT PLQIGLATIA VLWVCTIANF GGARITGQIS SVTVWGVIIP VVGLCIIGWF WFSPSMYVAS WNPHHVPFFS AVGSSIAMTL WAFLGLESAC ANADVVENPE KNVPIAVLGG TLGAAVIYIV STNVIAGIVP NMDLANSTAP FGLAFAQMFT PAVGKVIMAL MVMSCCGSLL GWQFTIAQVF KSSADEGYFP KVFSRVTKVD APVQGMLIIV IIQTGLSLMT ISPSLNSQFN VLVNLAVVTN IIPYILSMAA LVIIQKMANV PSSKAKVANF VAFVGAMYSF YALYSSGEEA MLYGSIVTFL GWTLYGLVSP RFELKNKHG
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