Gene SeD_A0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0796 
Symbol 
ID6875083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp788990 
End bp790294 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content54% 
IMG OID642783991 
Productcitrate-proton symporter 
Protein accessionYP_002214670 
Protein GI198241780 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00883] metabolite-proton symporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAC ACACACCTGC AACATCGCGC GCCGGCACGT TCGGCGCAAT ACTGCGCGTG 
ACAAGCGGCA ATTTTCTTGA ACAGTTTGAT TTTTTCTTGT TCGGATTTTA CGCCACCTAT
ATCGCCAGAA CGTTTTTTCC GGCGGAAAGC GAATTTGCCT CATTAATGTT GACCTTTGCC
GTCTTTGGCT CCGGTTTTTT AATGCGCCCC GTCGGCGCGA TTGTGCTTGG CGCCTATATT
GACAGAATCG GACGCCGTAA AGGGCTGATG GTGACACTGG CGATTATGGG CTGCGGTACG
TTGCTCATCG CCCTCGTCCC CGGCTACCAA ACGATCGGCC TGGCAGCGCC TGCGTTGGTG
CTGTTGGGCC GGTTATTACA AGGATTTTCT GCGGGCGTTG AGTTAGGCGG CGTCTCGGTC
TATCTGTCCG AAATCGCAAC GCCAGGCAAT AAAGGGTTTT ATACCAGCTG GCAATCCGCC
AGTCAGCAGG TCGCGATCGT TGTTGCCGCG TTGATTGGTT ATAGCCTGAA TATCACGCTG
GGACACGACG CGATATCGGA GTGGGGCTGG CGAATTCCGT TCTTTATCGG CTGTATGATC
ATTCCGCTGA TTTTTGTTTT ACGTCGTTCA TTACAAGAAA CAGAGGCGTT TTTACAACGC
AAGCATCGCC CCGACACCAG GGAAATTTTT GCAACTATCG CCAAAAACTG GCGCATTATT
ACGGCCGGAA CGCTGCTGGT GGCGATGACC ACCACAACGT TTTATTTTAT CACCGTTTAT
ACGCCGACCT ATGGCAGAAC CGTGCTTAAT CTCAGCGCGC GGGACAGTTT GATCGTCACC
ATGTTGGTGG GGGTGTCCAA TTTTATCTGG TTACCCATTG GCGGCGCGAT TTCCGACCGG
ATTGGCCGTC GCGCCGTATT AATGGGCATT ACGTTGCTGG CGCTGATCAC CACCTGGCCC
GTCATGCAAT GGCTGACCGC CGCGCCCGAC TTTACCCGCA TGACGCTGGT ACTGCTGTGG
TTCTCTTTCT TTTTTGGCAT GTATAACGGC GCAATGGTCG CGGCGTTAAC CGAAGTGATG
CCAGTCTATG TGCGTACCGT TGGTTTCTCG CTGGCCTTTA GCCTGGCGAC GGCGATTTTT
GGCGGCCTGA CGCCGGCCAT CTCTACCGCG CTGGTAAAGT TAACCGGCGA CAAAAGCTCG
CCCGGCTGGT GGCTGATGTG CGCGGCATTA TGTGGACTTG CCGCGACGGC GATGCTGTTT
GTACGTCTGA GTCGCGGCTA TATCGCGGCA GAAAATAAAG CCTGA
 
Protein sequence
MAQHTPATSR AGTFGAILRV TSGNFLEQFD FFLFGFYATY IARTFFPAES EFASLMLTFA 
VFGSGFLMRP VGAIVLGAYI DRIGRRKGLM VTLAIMGCGT LLIALVPGYQ TIGLAAPALV
LLGRLLQGFS AGVELGGVSV YLSEIATPGN KGFYTSWQSA SQQVAIVVAA LIGYSLNITL
GHDAISEWGW RIPFFIGCMI IPLIFVLRRS LQETEAFLQR KHRPDTREIF ATIAKNWRII
TAGTLLVAMT TTTFYFITVY TPTYGRTVLN LSARDSLIVT MLVGVSNFIW LPIGGAISDR
IGRRAVLMGI TLLALITTWP VMQWLTAAPD FTRMTLVLLW FSFFFGMYNG AMVAALTEVM
PVYVRTVGFS LAFSLATAIF GGLTPAISTA LVKLTGDKSS PGWWLMCAAL CGLAATAMLF
VRLSRGYIAA ENKA