| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0787 |
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| Symbol | |
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| ID | 6872759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 778296 |
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| End bp | 779048 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642783984 |
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| Product | UMP phosphatase |
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| Protein accession | YP_002214663 |
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| Protein GI | 198242950 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.16155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.744456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATCA AGAATGTAAT CTGCGATATC GACGGCGTGC TGATGCACGA CAACGTAGCC
GTACCCGGTG CGGCGGAATT TCTGACGGGG ATTCTGGAAA AAGGTCTGCC GCTGGTGCTG
CTGACCAATT ACCCGTCGCA AACCGGCCAG GATCTGGCGA ACCGTTTTGC TACCGCTGGC
GTTAACGTGC CGGACAGCGT GTTTTATACG TCAGCAATGG CGACAGCCGA TTTTCTGCGC
CGTCAGGAAG GTAAAAAAGC GTATGTCGTG GGCGAAGGCG CGCTTATTCA CGAGCTCTAT
AAAGCAGGTT TTACCATTAC CGATGTGAAC CCTGATTTTG TCATCGTTGG AGAAACCCGC
TCCTACAACT GGGACATGAT GCATAAAGCA GCATTTTTCG TCGCCAATGG CGCGCGCTTT
ATCGCTACCA ACCCGGATAC TCACGGTCGC GGCTTTTATC CGGCCTGCGG CGCGCTGTGC
GCAGGCATTG AAAAAATTTC CGGCCGGAAG CCGTTTTATG TCGGCAAACC CAGCCCGTGG
ATCATCCGCG CGGCGTTAAA CAAAATGCAG GCGCACTCGG AAGAGACCGT TATCGTCGGC
GACAACCTGC GCACCGACAT TCTGGCGGGG TTCCAGGCCG GTCTGGAGAC CATTCTGGTG
CTTTCAGGCG TATCAACAAT CAATGATATT GACAGTATGC CGTTCCGCCC AAGCTGGATT
TACCCTTCCG TCGCCGAGAT AGACGTTATC TAA
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| Protein sequence | MTIKNVICDI DGVLMHDNVA VPGAAEFLTG ILEKGLPLVL LTNYPSQTGQ DLANRFATAG
VNVPDSVFYT SAMATADFLR RQEGKKAYVV GEGALIHELY KAGFTITDVN PDFVIVGETR
SYNWDMMHKA AFFVANGARF IATNPDTHGR GFYPACGALC AGIEKISGRK PFYVGKPSPW
IIRAALNKMQ AHSEETVIVG DNLRTDILAG FQAGLETILV LSGVSTINDI DSMPFRPSWI
YPSVAEIDVI
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