Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0776 |
Symbol | miaB |
ID | 6875511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 771889 |
End bp | 773313 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642783973 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_002214659 |
Protein GI | 198245491 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.410569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.687788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAAA AACTCCATAT TAAAACCTGG GGCTGTCAGA TGAACGAGTA CGATTCATCG AAGATGGCCG ATCTGCTGGA CGCCACCCAC GGCTATCAAC TGACCGACGT GGCGGAAGAG GCGGATGTGC TGCTGTTGAA TACCTGCTCA ATCCGCGAGA AGGCTCAGGA AAAAGTCTTC CATCAATTAG GTCGCTGGAG ACTGTTAAAA GAGAAAAATC CCGATCTGAT TATCGGCGTC GGCGGCTGCG TGGCTTCCCA GGAAGGCGAG CACATTCGTC AACGCGCCCA TTACGTCGAC ATTATTTTTG GCCCGCAAAC CTTACACCGC CTACCGGAGA TGATTAACTC CGTGCGTGGC GACCGCAGCC CGGTGGTCGA TATCAGCTTC CCGGAAATCG AGAAGTTCGA CCGTTTGCCG GAACCGCGCG CCGAAGGCCC GACCGCTTTC GTTTCTATCA TGGAAGGCTG CAATAAATAT TGTACTTACT GCGTGGTACC GTATACCCGC GGTGAAGAAG TCAGCCGTCC CTCAGACGAT ATCCTGTTCG AAATCGCCCA GTTAGCGGCG CAGGGCGTGC GTGAGGTCAA CCTGCTGGGC CAGAACGTTA ACGCCTGGCG CGGAGAAAAC TACGACGGCA CCACCGGTAC CTTTGCCGAT CTGCTGCGTC TGGTTGCCGC CATCGACGGC ATTGACCGTA TTCGCTTTAC CACCAGCCAT CCGATTGAGT TCACCGACGA TATTATCGAG GTGTACCGCG ATACGCCGGA ACTGGTCAGT TTCCTGCATC TGCCGGTACA GAGCGGTTCC GATCGCGTGT TGAATCTGAT GGGGCGCACC CACACTGCGC TGGAATATAA AGCAATCATC CGTAAACTGC GCGCGGCGCG GCCGGACATT CAGATAAGCT CTGACTTTAT CGTCGGATTC CCTGGCGAAA CTACCGATGA TTTCGAAAAA ACCATGAAGC TTATCGCTGA CGTCAACTTT GATATGAGCT ACAGCTTTAT CTTCTCTGCG CGTCCGGGAA CGCCGGCTGC CGATATGGTT GATGACGTAC CGGAAGAAGA GAAGAAGCAG CGTCTGTATA TTCTGCAAGA GCGTATCAAT CAGCAGGCGA TGGCATGGAG CCGCCGTATG CTCGGCACGA CACAGCGCAT TCTGGTGGAA GGCACGTCAC GTAAAAACAT TATGGAACTG TCTGGCCGTA CCGAAAACAA TCGGGTGGTG AACTTTGAAG GCACGCCGGA GATGATTGGT AAGTTTGTCG ATGTGGAAAT TACTGACGTC TATCCGAACT CCCTGCGCGG AAAAGTGGTG CGTACCGAAG ATGAAATGGG GCTGCGCGTC GCCGAAACGC CGGAGTCCGT CATTGCCCGT ACCCGTAAAG AAAATGAGCT GGGCGTAGGA TTCTACCAGC CTTAA
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Protein sequence | MTKKLHIKTW GCQMNEYDSS KMADLLDATH GYQLTDVAEE ADVLLLNTCS IREKAQEKVF HQLGRWRLLK EKNPDLIIGV GGCVASQEGE HIRQRAHYVD IIFGPQTLHR LPEMINSVRG DRSPVVDISF PEIEKFDRLP EPRAEGPTAF VSIMEGCNKY CTYCVVPYTR GEEVSRPSDD ILFEIAQLAA QGVREVNLLG QNVNAWRGEN YDGTTGTFAD LLRLVAAIDG IDRIRFTTSH PIEFTDDIIE VYRDTPELVS FLHLPVQSGS DRVLNLMGRT HTALEYKAII RKLRAARPDI QISSDFIVGF PGETTDDFEK TMKLIADVNF DMSYSFIFSA RPGTPAADMV DDVPEEEKKQ RLYILQERIN QQAMAWSRRM LGTTQRILVE GTSRKNIMEL SGRTENNRVV NFEGTPEMIG KFVDVEITDV YPNSLRGKVV RTEDEMGLRV AETPESVIAR TRKENELGVG FYQP
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