Gene SeD_A0776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0776 
SymbolmiaB 
ID6875511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp771889 
End bp773313 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content54% 
IMG OID642783973 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionYP_002214659 
Protein GI198245491 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.410569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.687788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA AACTCCATAT TAAAACCTGG GGCTGTCAGA TGAACGAGTA CGATTCATCG 
AAGATGGCCG ATCTGCTGGA CGCCACCCAC GGCTATCAAC TGACCGACGT GGCGGAAGAG
GCGGATGTGC TGCTGTTGAA TACCTGCTCA ATCCGCGAGA AGGCTCAGGA AAAAGTCTTC
CATCAATTAG GTCGCTGGAG ACTGTTAAAA GAGAAAAATC CCGATCTGAT TATCGGCGTC
GGCGGCTGCG TGGCTTCCCA GGAAGGCGAG CACATTCGTC AACGCGCCCA TTACGTCGAC
ATTATTTTTG GCCCGCAAAC CTTACACCGC CTACCGGAGA TGATTAACTC CGTGCGTGGC
GACCGCAGCC CGGTGGTCGA TATCAGCTTC CCGGAAATCG AGAAGTTCGA CCGTTTGCCG
GAACCGCGCG CCGAAGGCCC GACCGCTTTC GTTTCTATCA TGGAAGGCTG CAATAAATAT
TGTACTTACT GCGTGGTACC GTATACCCGC GGTGAAGAAG TCAGCCGTCC CTCAGACGAT
ATCCTGTTCG AAATCGCCCA GTTAGCGGCG CAGGGCGTGC GTGAGGTCAA CCTGCTGGGC
CAGAACGTTA ACGCCTGGCG CGGAGAAAAC TACGACGGCA CCACCGGTAC CTTTGCCGAT
CTGCTGCGTC TGGTTGCCGC CATCGACGGC ATTGACCGTA TTCGCTTTAC CACCAGCCAT
CCGATTGAGT TCACCGACGA TATTATCGAG GTGTACCGCG ATACGCCGGA ACTGGTCAGT
TTCCTGCATC TGCCGGTACA GAGCGGTTCC GATCGCGTGT TGAATCTGAT GGGGCGCACC
CACACTGCGC TGGAATATAA AGCAATCATC CGTAAACTGC GCGCGGCGCG GCCGGACATT
CAGATAAGCT CTGACTTTAT CGTCGGATTC CCTGGCGAAA CTACCGATGA TTTCGAAAAA
ACCATGAAGC TTATCGCTGA CGTCAACTTT GATATGAGCT ACAGCTTTAT CTTCTCTGCG
CGTCCGGGAA CGCCGGCTGC CGATATGGTT GATGACGTAC CGGAAGAAGA GAAGAAGCAG
CGTCTGTATA TTCTGCAAGA GCGTATCAAT CAGCAGGCGA TGGCATGGAG CCGCCGTATG
CTCGGCACGA CACAGCGCAT TCTGGTGGAA GGCACGTCAC GTAAAAACAT TATGGAACTG
TCTGGCCGTA CCGAAAACAA TCGGGTGGTG AACTTTGAAG GCACGCCGGA GATGATTGGT
AAGTTTGTCG ATGTGGAAAT TACTGACGTC TATCCGAACT CCCTGCGCGG AAAAGTGGTG
CGTACCGAAG ATGAAATGGG GCTGCGCGTC GCCGAAACGC CGGAGTCCGT CATTGCCCGT
ACCCGTAAAG AAAATGAGCT GGGCGTAGGA TTCTACCAGC CTTAA
 
Protein sequence
MTKKLHIKTW GCQMNEYDSS KMADLLDATH GYQLTDVAEE ADVLLLNTCS IREKAQEKVF 
HQLGRWRLLK EKNPDLIIGV GGCVASQEGE HIRQRAHYVD IIFGPQTLHR LPEMINSVRG
DRSPVVDISF PEIEKFDRLP EPRAEGPTAF VSIMEGCNKY CTYCVVPYTR GEEVSRPSDD
ILFEIAQLAA QGVREVNLLG QNVNAWRGEN YDGTTGTFAD LLRLVAAIDG IDRIRFTTSH
PIEFTDDIIE VYRDTPELVS FLHLPVQSGS DRVLNLMGRT HTALEYKAII RKLRAARPDI
QISSDFIVGF PGETTDDFEK TMKLIADVNF DMSYSFIFSA RPGTPAADMV DDVPEEEKKQ
RLYILQERIN QQAMAWSRRM LGTTQRILVE GTSRKNIMEL SGRTENNRVV NFEGTPEMIG
KFVDVEITDV YPNSLRGKVV RTEDEMGLRV AETPESVIAR TRKENELGVG FYQP