Gene SeD_A0774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0774 
Symbol 
ID6874401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp770168 
End bp770641 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content54% 
IMG OID642783971 
Productputative metalloprotease 
Protein accessionYP_002214657 
Protein GI198244509 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG TGATCCTCGA TTTACAGTTG GCCTGTGAAA ACCACGCGGG CCTGCCGGAT 
GAAGCTCAGT TTCAACGCTG GCTGGACGGC GTTATTCCGC AGTTTCAGGA AGAGGCGGAA
GTCACAATCC GTCTGGTGGA TGAGACCGAA AGCCACGACC TTAATCTGAC GTACCGCGGG
AAAGATAAAC CCACTAATGT TCTCTCCTTC CCGTTTGAAG CGCCCCCCGG TATTGAAATG
CCGCTACTGG GCGATCTGAT TATTTGCCGT CAGGTCGTGG AGCAGGAAGC GCAGGAACAG
AGCAAGCCGC TGGAAGCGCA CTGGGCGCAC ATGGTCGTGC ACGGTAGCCT GCATTTGCTG
GGTTACGATC ATATCGACGA TGACGAAGCG GAAGAGATGG AGTCTCTCGA AACGGAGATT
ATGCTTGCTA TGGGCTATGA GGATCCGTAC ATTGCCGAGA AGATTGCAGA ATAG
 
Protein sequence
MSQVILDLQL ACENHAGLPD EAQFQRWLDG VIPQFQEEAE VTIRLVDETE SHDLNLTYRG 
KDKPTNVLSF PFEAPPGIEM PLLGDLIICR QVVEQEAQEQ SKPLEAHWAH MVVHGSLHLL
GYDHIDDDEA EEMESLETEI MLAMGYEDPY IAEKIAE