Gene SeD_A0714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0714 
Symbol 
ID6873843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp715442 
End bp716680 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content54% 
IMG OID642783920 
Productoxidoreductase, zinc-binding dehydrogenase family 
Protein accessionYP_002214606 
Protein GI198242667 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TGACGTATCA CGGTCCACAT CACGTAAAGG TTGAAAACGT ACCCGATCCC 
GGCATTGAGC TGCCTGACGA TATCATTTTG CGTGTTACCG CCACCGCAAT TTGCGGATCT
GATTTGCATC TCTATCGCGG CAAGATCCCA CAGGTAAAAC ATGGTGATAT TTTCGGCCAT
GAATTTATGG GCGAGGTGGT GGAAACCGGA CATGATGTGA AGAATATTCG GAAAGGGGAT
CGGGTCGTTA TCCCGTTTGT CATTGCCTGT GGTGACTGTT TTTTCTGTCG GCTACAGCAA
TATTCAGCGT GTGAAAACAC TAACGACGGA CACGGCGCGG CGATGAATAA AAAACAGATC
CCGCCACCGG CGGCGCTGTT TGGGTATAGC CATCTGTATG GCGGCGTTCC CGGCGGACAG
GCCGAATATG TTCGCGTGCC AAAAGGTAAT GTTGGTCCAT TTAAGGTGCC GCCGCTGTTA
TCTGACGATA AGGCGCTGTT TCTTTCTGAT ATTTTGCCTA CCGCCTGGCA GGCGGCAAAA
AATGCCCAGA TTCAGCAAGG TTCCAGCGTG GCGGTTTTTG GCGCAGGGCC TGTAGGATTA
CTGACTATCG CCTGTGCGCG ACTGCTGGGC GCGGAGCAGA TCTTCGTCGT TGATCACCAC
GCCTGGCGCT TGCGTTTCGC CGAAGAACGT TACGGCGCGA TACCGATCAA CTTCGATGAT
GAGAACGATC CGGCGGAAAA AATCATCGAG CAGACGGCAG GACACCGCGG CGTGGACGCG
GTAATTGATG CCGTAGGCTT TGAAGCGAAA GGCAGCTTGA CGGAGACGGT GCTGACGAAC
CTTAAACTGG AAGGCAGCAG CGGCAAAGCG CTGCGACAAT GTATCGCGGC GGTCAGACGC
GGCGGCGTGG TCAGCGTGCC CGGCGTGTAT GCCGGTTTTA TTCACGGCTT TTTATTCGGC
GACGCCTTTG ATAAGGGGCT AACTTTTAAA ATGGGTCAAA CCCATGTTCA CGCGTGGCTG
GGGGAACTAT TACCGCTTAT TGAAAAAGGG TTGCTGAAGC CGGAGGAGAT TGTCACGCAC
TATATGCCGT TTGAAGAGGC AGCGCGCGGC TACGAAATTT TCGAAAAACG CGAAGAAGAG
TGCCGGAAGG TTATCTTGGT GCCGGGAGCG ACGTCGGCAC AAGCGGCGCA GAAACAGGCG
ACGGGAGTAA TCAATCCGAT GCCAGGCGGC GTTGTCTGA
 
Protein sequence
MKALTYHGPH HVKVENVPDP GIELPDDIIL RVTATAICGS DLHLYRGKIP QVKHGDIFGH 
EFMGEVVETG HDVKNIRKGD RVVIPFVIAC GDCFFCRLQQ YSACENTNDG HGAAMNKKQI
PPPAALFGYS HLYGGVPGGQ AEYVRVPKGN VGPFKVPPLL SDDKALFLSD ILPTAWQAAK
NAQIQQGSSV AVFGAGPVGL LTIACARLLG AEQIFVVDHH AWRLRFAEER YGAIPINFDD
ENDPAEKIIE QTAGHRGVDA VIDAVGFEAK GSLTETVLTN LKLEGSSGKA LRQCIAAVRR
GGVVSVPGVY AGFIHGFLFG DAFDKGLTFK MGQTHVHAWL GELLPLIEKG LLKPEEIVTH
YMPFEEAARG YEIFEKREEE CRKVILVPGA TSAQAAQKQA TGVINPMPGG VV