| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0705 |
|---|
| Symbol | ahpC |
|---|
| ID | 6873598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 707866 |
|---|
| End bp | 708429 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642783915 |
|---|
| Product | alkyl hydroperoxide reductase subunit C |
|---|
| Protein accession | YP_002214601 |
|---|
| Protein GI | 198244619 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0450] Peroxiredoxin |
|---|
| TIGRFAM ID | [TIGR03137] peroxiredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 0.129921 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTAA TTAACACCAA AATCAAACCT TTCAAAAACC AGGCGTTCAA AAACGGTGAA
TTCATTGAAG TCACCGAGAA AGATACCGAA GGCCGCTGGA GCGTCTTCTT CTTCTACCCG
GCCGATTTTA CCTTTGTTTG CCCGACTGAA CTGGGTGACG TTGCCGACCA TTACGAAGAA
CTGCAGAAGC TGGGCGTAGA CGTTTATTCC GTCTCAACCG ATACTCACTT CACGCATAAA
GCATGGCACA GCAGCTCTGA AACTATCGCA AAAATCAAAT ATGCGATGAT CGGCGACCCG
ACTGGCGCCC TGACCCGTAA CTTCGACAAC ATGCGTGAAG ACGAAGGTTT GGCAGACCGT
GCAACCTTTG TTGTTGACCC GCAGGGTATC ATCCAGGCGA TCGAAGTTAC CGCTGAAGGT
ATCGGCCGTG ACGCGTCTGA CCTGCTGCGT AAAATTAAAG CAGCACAGTA CGTTGCCGCT
CACCCAGGCG AAGTATGCCC GGCGAAATGG AAAGAAGGTG AAGCGACTCT GGCTCCATCC
TTAGACCTGG TCGGTAAAAT TTAA
|
|---|
| Protein sequence | MSLINTKIKP FKNQAFKNGE FIEVTEKDTE GRWSVFFFYP ADFTFVCPTE LGDVADHYEE
LQKLGVDVYS VSTDTHFTHK AWHSSSETIA KIKYAMIGDP TGALTRNFDN MREDEGLADR
ATFVVDPQGI IQAIEVTAEG IGRDASDLLR KIKAAQYVAA HPGEVCPAKW KEGEATLAPS
LDLVGKI
|
|---|
| |