Gene SeD_A0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0676 
Symbol 
ID6872155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp675565 
End bp676146 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content54% 
IMG OID642783888 
ProductTetR family transcriptional regulator 
Protein accessionYP_002214574 
Protein GI198242200 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0323458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCGTC CGAAGAGTGA AGACAAAAAA CAAGCATTAC TGGAAGCGGC AACCCAGGCG 
ATAGCGCAAT CCGGTATCGC CGCCTCAACG GCGGTGATTG CGCGTAACGC AGGTGTTGCA 
GAAGGAACAT TGTTTCGCTA TTTCGCGACC AAAGATGAGC TGATTAACAC GTTGTATTTG 
CATTTAAAGC AGGATCTCTG CCAGTCAATG ATAATGGAGC TGGATCGATC CATTACCGAT 
GCCAAAACGA TGACCCGCTT TATCTGGAAC AGTTACATCA GTTGGGGTCT GAACCATCCC 
GCGCGCCACC GGGCGATCCG TCAACTGGCC GTCAGCGAAA AGCTCACCAA AGAGACGGAA 
CAACGGGCCG ACGATATGTT CCCCGAATTG CGCGATTTAT GTCATCGTTC CGTTTTGATG 
GTGTTTATGT CGGATGAGTA CCGCGCCTTC GGCGACGGCC TTTTTCTGGC GCTGGCTGAA 
ACAACAATGG ATTTCGCCGC GCGCGATCCC GCTCGCGCTG GCGAATATAT TGCGCTGGGA 
TTCGAAGCGA TGTGGCGCGC GCTGACTCGC GAGGAGCAAT AA
 
Protein sequence
MARPKSEDKK QALLEAATQA IAQSGIAAST AVIARNAGVA EGTLFRYFAT KDELINTLYL 
HLKQDLCQSM IMELDRSITD AKTMTRFIWN SYISWGLNHP ARHRAIRQLA VSEKLTKETE 
QRADDMFPEL RDLCHRSVLM VFMSDEYRAF GDGLFLALAE TTMDFAARDP ARAGEYIALG 
FEAMWRALTR EEQ