Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0520 |
Symbol | acrA |
ID | 6875629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 535735 |
End bp | 536928 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642783742 |
Product | acriflavine resistance protein A |
Protein accession | YP_002214429 |
Protein GI | 198242104 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0763854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 94 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAA ACAGAGGGTT AACGCCTCTG GCGGTCGTTC TGATGCTCTC AGGCAGCTTA GCGCTAACAG GATGTGACGA CAAACAGGAC CAGCAAGGCG GCCAGCAGAT GCCAGAAGTT GGAGTTGTCA CACTAAAAAC GGAACCACTG CAAATCACAA CTGAACTTCC GGGTCGTACC GTTGCTTACC GTATCGCCGA AGTTCGCCCA CAGGTAAGCG GCATTATCCT GAAGCGTAAT TTCGTTGAGG GAAGTGATAT CGAAGCGGGA GTCTCTCTCT ATCAGATTGA TCCTGCGACC TACCAGGCGA CTTACGACAG CGCTAAGGGC GATCTGGCAA AAGCGCAGGC CGCCGCGAAT ATCGCTGAAC TGACGGTGAA GCGTTATCAA AAGCTGCTGG GTACGCAGTA CATCAGTAAG CAGGAATACG ATCAGGCGCT GGCTGACGCG CAACAAGCGA CTGCCGCCGT TGTCGCAGCA AAAGCCGCCG TTGAAACCGC ACGTATCAAC CTGGCGTATA CCAAAGTCAC CTCGCCGATT AGCGGTCGTA TTGGTAAGTC GTCCGTAACG GAAGGCGCGC TGGTACAGAA CGGTCAGGCG TCGGCGCTGG CGACAGTGCA GCAGCTGGAC CCTATTTATG TCGATGTGAC CCAGTCCAGC AATGACTTCC TGCGCCTGAA GCAGGAGCTG GCAAATGGTT CGCTGAAACA GGAAAACGGC AAAGCGAAGG TCGATCTGGT GACCAGCGAC GGTATCAAAT TCCCGCAGTC CGGTACGCTT GAGTTCTCCG ACGTGACCGT TGACCAAACC ACCGGGTCTA TTACTTTGCG CGCCATCTTC CCTAACCCGG ATCACACCTT ATTGCCAGGA ATGTTCGTTC GCGCACGTCT GCAGGAAGGG ACAAAACCGA CGGCATTACT GGTTCCACAA CAGGGCGTTA CCCGTACTCC ACGCGGCGAT GCCACGGTGC TGGTGGTTGG CGCTGATAAC AAAGTGGAAA CCCGCCAAAT CGTCGCAAGC CAGGCGATCG GCGATAAGTG GCTGGTGACT GACGGGTTGA AAGCGGGCGA CCGCGTAGTC GTCAGCGGGC TGCAAAAAGT ACGTCCTGGC GCACAGGTTA AAGTGCAGGA AATTACCGCG GATAACAAAC AGCAAGCCGC AAGCGGTGAT CAACCTGCTC AGCCCAGGTC TTAA
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Protein sequence | MNKNRGLTPL AVVLMLSGSL ALTGCDDKQD QQGGQQMPEV GVVTLKTEPL QITTELPGRT VAYRIAEVRP QVSGIILKRN FVEGSDIEAG VSLYQIDPAT YQATYDSAKG DLAKAQAAAN IAELTVKRYQ KLLGTQYISK QEYDQALADA QQATAAVVAA KAAVETARIN LAYTKVTSPI SGRIGKSSVT EGALVQNGQA SALATVQQLD PIYVDVTQSS NDFLRLKQEL ANGSLKQENG KAKVDLVTSD GIKFPQSGTL EFSDVTVDQT TGSITLRAIF PNPDHTLLPG MFVRARLQEG TKPTALLVPQ QGVTRTPRGD ATVLVVGADN KVETRQIVAS QAIGDKWLVT DGLKAGDRVV VSGLQKVRPG AQVKVQEITA DNKQQAASGD QPAQPRS
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