Gene SeD_A0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0504 
Symbol 
ID6873659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp521845 
End bp523626 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content58% 
IMG OID642783727 
Productputative multidrug transporter membraneATP-binding components 
Protein accessionYP_002214414 
Protein GI198242112 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTAGTT TTGGACAGCT ATGGCCGACG CTGAAACGGT TGCTGGCGTA TGGCTCGCCA 
TGGCGAAAAC CGCTCTCTGT CGCGGTGATG ATGCTGTGGA TTGCGGCGGC GGCGGAGGTT
AGCGGTCCGC TGCTGATCAG CTATTTCATT GATAACATGG TGGCCCGCCA CCATTTACCG
TTGGGCAAGG TCGCGGGGCT GGCGGCCGCC TATGTGGGGC TACAGTTTCT GGCGGCGGGT
CTCCATTACG CCCAGTCTTT ATTATTTAAC CGGGCGGCCG TTGGCGTGGT TCAGTCCTTG
CGCACGGACG TCATGGATGC CGCCTTGCGT CAGCCGCTAA GCGCCTTCGA CACGCAGCCT
GTCGGACAAT TAATTTCACG CGTGACCAAC GATACGGAAG TCATCCGCGA TCTGTACGTC
ACGGTCGTCG CAACGGTATT ACGTAGCGCG GCGTTGATCG GCGCCATGCT GGTCGCTATG
TTCAGCCTTG ACTGGCGGAT GGCGCTGGTG GCGGTTTTGA TTTTTCCGGC GGTATTGACC
GTGATGGTCA TTTATCAGCG CTACAGCACG CCGATTGTAC GCCGCGTGCG GGCATACCTG
GCGGATATTA ACGACGGCTT TAACGAAATC ATCAATGGGA TGAGCGTAAT CCAGCAGTTT
CGCCAGCAGG CGCGCTTCGG CGAACGCATG GGCGAGGCCA GCCGCTCGCA CTACATGGCG
CGGATGCAGA CGCTGCGCTT GGACGGCTTT TTATTGCGTC CGCTGCTTAG CCTCTTTTCC
GCGCTCATTT TATGCGGTTT GTTGATGCTT TTCAGCTTTA CGTCTGCCGG CACGATTGAG
GTCGGGGTGC TGTATGCGTT CATTAGCTAT TTGTCACGTC TGAACGAGCC GCTCATTGAA
CTGACCACCC AGCAATCCAT GCTACAGCAG GCGGTTGTGG CGGGAGAGCG TGTTTTTGAA
CTGATGGATC GCCCGCGCCA GCGCTATGGC AGCGACGACA GGCCGTTACA AAGCGGGGCG
ATTGATATTG ATCATCTGTC GTTTGCTTAC CGCGACGATA ATCTTGTTTT ACAGGACATT
ACGCTATCAG TACCGTCCCG TAGCTTTGTG GCGCTGGTGG GGCACACCGG CAGCGGGAAG
AGCACGCTCG CCAGCTTATT AATGGGGTAT TACCCCCTGA CACAAGGCGA AATTCGGCTG
GATGGGCGAG AAATCGCCTC TCTTAATCAT CGCGTTTTAC GCCAGGGCGT GGCGATGGTT
CAACAGGACC CGGTAGTGAT GGCGGATACC TTTCTGGCTA ATGTGACGCT GGGGCGCGAT
GTCTCCGAGG CGCAGGTGTG GCAGGCGCTG GAAACGGTAC AACTGGCAGA TCTGGCGCGC
GGCCTGAGCG ACGGGCTGCA TACGCATCTC GGCGAGCAGG GAAATACGCT GTCCGTCGGG
CAAAAACAGC TATTGGCGCT GGCGCGCGTG CTGGTTGACG CCCCGCAAAT ATTAATTCTT
GATGAAGCGA CGGCCAGCAT CGATTCCGGC ACTGAGCAGG CGATACAGCA GGCGCTGGCG
GCGATTCGCG AGCGCACCAC GTTGGTGGTT ATTGCCCATC GGCTATCGAC AATCGTGGAG
GCGGATACCA TTCTGGTTCT CCATCGCGGC CAGGCGGTGG AGCGCGGGAC GCATCAACAA
TTGCTGGCGG CGCAAGGGCG CTACTGGCAA ATGTATCAAT TACAGTTAGT TGGCGAGGAG
TTAGCCGCCA GCGTACACGA AGAACCCGGC CCTGCGGCAT AA
 
Protein sequence
MRSFGQLWPT LKRLLAYGSP WRKPLSVAVM MLWIAAAAEV SGPLLISYFI DNMVARHHLP 
LGKVAGLAAA YVGLQFLAAG LHYAQSLLFN RAAVGVVQSL RTDVMDAALR QPLSAFDTQP
VGQLISRVTN DTEVIRDLYV TVVATVLRSA ALIGAMLVAM FSLDWRMALV AVLIFPAVLT
VMVIYQRYST PIVRRVRAYL ADINDGFNEI INGMSVIQQF RQQARFGERM GEASRSHYMA
RMQTLRLDGF LLRPLLSLFS ALILCGLLML FSFTSAGTIE VGVLYAFISY LSRLNEPLIE
LTTQQSMLQQ AVVAGERVFE LMDRPRQRYG SDDRPLQSGA IDIDHLSFAY RDDNLVLQDI
TLSVPSRSFV ALVGHTGSGK STLASLLMGY YPLTQGEIRL DGREIASLNH RVLRQGVAMV
QQDPVVMADT FLANVTLGRD VSEAQVWQAL ETVQLADLAR GLSDGLHTHL GEQGNTLSVG
QKQLLALARV LVDAPQILIL DEATASIDSG TEQAIQQALA AIRERTTLVV IAHRLSTIVE
ADTILVLHRG QAVERGTHQQ LLAAQGRYWQ MYQLQLVGEE LAASVHEEPG PAA