Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0504 |
Symbol | |
ID | 6873659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 521845 |
End bp | 523626 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642783727 |
Product | putative multidrug transporter membraneATP-binding components |
Protein accession | YP_002214414 |
Protein GI | 198242112 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTAGTT TTGGACAGCT ATGGCCGACG CTGAAACGGT TGCTGGCGTA TGGCTCGCCA TGGCGAAAAC CGCTCTCTGT CGCGGTGATG ATGCTGTGGA TTGCGGCGGC GGCGGAGGTT AGCGGTCCGC TGCTGATCAG CTATTTCATT GATAACATGG TGGCCCGCCA CCATTTACCG TTGGGCAAGG TCGCGGGGCT GGCGGCCGCC TATGTGGGGC TACAGTTTCT GGCGGCGGGT CTCCATTACG CCCAGTCTTT ATTATTTAAC CGGGCGGCCG TTGGCGTGGT TCAGTCCTTG CGCACGGACG TCATGGATGC CGCCTTGCGT CAGCCGCTAA GCGCCTTCGA CACGCAGCCT GTCGGACAAT TAATTTCACG CGTGACCAAC GATACGGAAG TCATCCGCGA TCTGTACGTC ACGGTCGTCG CAACGGTATT ACGTAGCGCG GCGTTGATCG GCGCCATGCT GGTCGCTATG TTCAGCCTTG ACTGGCGGAT GGCGCTGGTG GCGGTTTTGA TTTTTCCGGC GGTATTGACC GTGATGGTCA TTTATCAGCG CTACAGCACG CCGATTGTAC GCCGCGTGCG GGCATACCTG GCGGATATTA ACGACGGCTT TAACGAAATC ATCAATGGGA TGAGCGTAAT CCAGCAGTTT CGCCAGCAGG CGCGCTTCGG CGAACGCATG GGCGAGGCCA GCCGCTCGCA CTACATGGCG CGGATGCAGA CGCTGCGCTT GGACGGCTTT TTATTGCGTC CGCTGCTTAG CCTCTTTTCC GCGCTCATTT TATGCGGTTT GTTGATGCTT TTCAGCTTTA CGTCTGCCGG CACGATTGAG GTCGGGGTGC TGTATGCGTT CATTAGCTAT TTGTCACGTC TGAACGAGCC GCTCATTGAA CTGACCACCC AGCAATCCAT GCTACAGCAG GCGGTTGTGG CGGGAGAGCG TGTTTTTGAA CTGATGGATC GCCCGCGCCA GCGCTATGGC AGCGACGACA GGCCGTTACA AAGCGGGGCG ATTGATATTG ATCATCTGTC GTTTGCTTAC CGCGACGATA ATCTTGTTTT ACAGGACATT ACGCTATCAG TACCGTCCCG TAGCTTTGTG GCGCTGGTGG GGCACACCGG CAGCGGGAAG AGCACGCTCG CCAGCTTATT AATGGGGTAT TACCCCCTGA CACAAGGCGA AATTCGGCTG GATGGGCGAG AAATCGCCTC TCTTAATCAT CGCGTTTTAC GCCAGGGCGT GGCGATGGTT CAACAGGACC CGGTAGTGAT GGCGGATACC TTTCTGGCTA ATGTGACGCT GGGGCGCGAT GTCTCCGAGG CGCAGGTGTG GCAGGCGCTG GAAACGGTAC AACTGGCAGA TCTGGCGCGC GGCCTGAGCG ACGGGCTGCA TACGCATCTC GGCGAGCAGG GAAATACGCT GTCCGTCGGG CAAAAACAGC TATTGGCGCT GGCGCGCGTG CTGGTTGACG CCCCGCAAAT ATTAATTCTT GATGAAGCGA CGGCCAGCAT CGATTCCGGC ACTGAGCAGG CGATACAGCA GGCGCTGGCG GCGATTCGCG AGCGCACCAC GTTGGTGGTT ATTGCCCATC GGCTATCGAC AATCGTGGAG GCGGATACCA TTCTGGTTCT CCATCGCGGC CAGGCGGTGG AGCGCGGGAC GCATCAACAA TTGCTGGCGG CGCAAGGGCG CTACTGGCAA ATGTATCAAT TACAGTTAGT TGGCGAGGAG TTAGCCGCCA GCGTACACGA AGAACCCGGC CCTGCGGCAT AA
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Protein sequence | MRSFGQLWPT LKRLLAYGSP WRKPLSVAVM MLWIAAAAEV SGPLLISYFI DNMVARHHLP LGKVAGLAAA YVGLQFLAAG LHYAQSLLFN RAAVGVVQSL RTDVMDAALR QPLSAFDTQP VGQLISRVTN DTEVIRDLYV TVVATVLRSA ALIGAMLVAM FSLDWRMALV AVLIFPAVLT VMVIYQRYST PIVRRVRAYL ADINDGFNEI INGMSVIQQF RQQARFGERM GEASRSHYMA RMQTLRLDGF LLRPLLSLFS ALILCGLLML FSFTSAGTIE VGVLYAFISY LSRLNEPLIE LTTQQSMLQQ AVVAGERVFE LMDRPRQRYG SDDRPLQSGA IDIDHLSFAY RDDNLVLQDI TLSVPSRSFV ALVGHTGSGK STLASLLMGY YPLTQGEIRL DGREIASLNH RVLRQGVAMV QQDPVVMADT FLANVTLGRD VSEAQVWQAL ETVQLADLAR GLSDGLHTHL GEQGNTLSVG QKQLLALARV LVDAPQILIL DEATASIDSG TEQAIQQALA AIRERTTLVV IAHRLSTIVE ADTILVLHRG QAVERGTHQQ LLAAQGRYWQ MYQLQLVGEE LAASVHEEPG PAA
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