Gene SeD_A0491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0491 
SymbolclpX 
ID6871900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp507398 
End bp508669 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content53% 
IMG OID642783716 
ProductATP-dependent protease ATP-binding subunit ClpX 
Protein accessionYP_002214403 
Protein GI198242558 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1219] ATP-dependent protease Clp, ATPase subunit 
TIGRFAM ID[TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0227044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATA AACGCAAAGA TGGCTCGGGC AAATTGTTGT ACTGCTCTTT TTGCGGCAAA 
AGCCAGCATG AAGTGCGCAA GCTGATTGCC GGTCCATCCG TGTATATCTG CGACGAATGC
GTCGATTTAT GTAACGACAT TATTCGCGAA GAAATTAAAG AAGTTGCTCC GCACCGTGAA
CGTAGTGCGC TGCCGACGCC GCATGAAATT CGTACCCACC TGGACGATTA CGTTATCGGC
CAGGAGCAGG CGAAAAAAGT GCTGGCGGTG GCGGTCTATA ACCACTACAA GCGTCTGCGT
AACGGCGATA CCAGCAATGG CGTCGAGTTA GGTAAAAGCA ACATTCTGCT GATTGGACCG
ACCGGTTCCG GTAAAACGCT GCTGGCGGAA ACGCTGGCGC GCTTGCTGGA TGTGCCGTTC
ACTATGGCGG ATGCGACCAC GCTAACCGAA GCGGGTTACG TTGGTGAAGA CGTCGAGAAT
ATCATTCAGA AACTGTTGCA GAAATGCGAC TACGACGTGC AAAAAGCGCA GCGTGGGATT
GTCTACATTG ATGAAATCGA TAAGATTTCG CGTAAATCAG ACAATCCGTC CATTACCCGC
GATGTTTCCG GCGAAGGCGT ACAGCAGGCG TTGCTGAAAC TGATCGAAGG CACCGTCGCC
GCGGTTCCAC CGCAGGGCGG TCGCAAACAT CCGCAGCAGG AGTTCTTACA GGTAGATACC
TCTAAGATTC TGTTTATCTG CGGCGGCGCG TTTGCCGGTC TGGATAAAGT GATCGCTAAC
CGTGTTGAAA CCGGCTCCGG CATTGGTTTT GGCGCGACGG TGAAAGCGAA GTCCGACAAA
GCCAGCGAAG GCGAGCTGTT GTCGCAGGTT GAACCGGAAG ATTTGATCAA ATTTGGTCTG
ATTCCTGAGT TTATCGGTCG TCTGCCAGTG GTAGCGACGC TGAATGAACT CAGCGAAGAA
GCGCTGATTC AAATCCTGAA AGAGCCGAAA AATGCGCTGA CCAAGCAGTA TCAGGCGCTG
TTTAACCTGG AAGGCGTCGA TCTGGAATTC CGTGACGAAG CGCTGGACGC TATCGCCAGG
AAAGCAATGG CGCGTAAAAC CGGCGCCCGT GGCCTGCGTT CTATCGTCGA AGCGGCGCTG
CTGGATACCA TGTACGATTT GCCATCTATG GAAGACGTCG AAAAAGTGGT GATCGACGAG
TCCGTTATTG CCGGTCAGAG TAAGCCGTTG CTGATTTACG GCAAACCGGA AGCGCAGGCT
TCTGGCGAAT AA
 
Protein sequence
MTDKRKDGSG KLLYCSFCGK SQHEVRKLIA GPSVYICDEC VDLCNDIIRE EIKEVAPHRE 
RSALPTPHEI RTHLDDYVIG QEQAKKVLAV AVYNHYKRLR NGDTSNGVEL GKSNILLIGP
TGSGKTLLAE TLARLLDVPF TMADATTLTE AGYVGEDVEN IIQKLLQKCD YDVQKAQRGI
VYIDEIDKIS RKSDNPSITR DVSGEGVQQA LLKLIEGTVA AVPPQGGRKH PQQEFLQVDT
SKILFICGGA FAGLDKVIAN RVETGSGIGF GATVKAKSDK ASEGELLSQV EPEDLIKFGL
IPEFIGRLPV VATLNELSEE ALIQILKEPK NALTKQYQAL FNLEGVDLEF RDEALDAIAR
KAMARKTGAR GLRSIVEAAL LDTMYDLPSM EDVEKVVIDE SVIAGQSKPL LIYGKPEAQA
SGE