Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0477 |
Symbol | |
ID | 6872415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 491679 |
End bp | 493043 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642783703 |
Product | inner membrane transport protein YajR |
Protein accession | YP_002214390 |
Protein GI | 198245030 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGATT ATAAAATGAC GCCAGGGGAG CTGCGTGCCA CATGGGGTTT AGGGACCGTC TTTTCGTTGC GTATGCTGGG CATGTTTATG GTTCTACCAG TACTGACCAC ATACGGTATG GCGCTACAGG GCGCCAGCGA AGCATTAATC GGCATTGCGA TCGGCATTTA CGGGCTGGCG CAGGCTATCT TTCAAATTCC CTTTGGGCTG CTGTCCGACC GCATTGGCCG CAAACCGCTG ATTGTCGGCG GACTGGCGGT ATTTGTCGCG GGCAGCGTCA TTGCCGCGCT CTCCCACTCA ATCTGGGGCA TTATTCTGGG GCGAGCGCTA CAAGGGTCCG GCGCTATTGC CGCCGCCGTC ATGGCGCTCC TGTCTGACCT CACCCGCGAG CAAAACCGTA CCAAAGCGAT GGCGTTTATC GGCGTCAGCT TTGGTATCAC CTTCGCGATT GCGATGGTAT TAGGGCCGAT CGTTACCCAT AGTCTGGGAT TGAACGCGTT GTTCTGGATG ATCGCCGCCC TCGCCACCCT GGGCATTATT TTGACGATCT GGGTGGTTCC CAACAATACC AACCATGTGC TGAATCGCGA ATCCGGGATG GTCAAAGGCA GCTTCAGTAA AGTGCTGGCG GAGCCGAGGC TGCTCAAGCT CAATTTAGGC ATTATGTGTC TGCATATTTT ATTGATGTCC ACCTTTGTCG CCCTGCCCGG CCAGCTTGCC GATGCCGGTT TCCCTGCCGC CGAACACTGG AAGGTGTATC TGGCAACCAT GGTAATCGCC TTTGCCGCCG TCGTGCCTTT TATTATCTAT GCTGAAGTCA AACGGCGGAT GAAGCAGGTA TTCCTGTTCT GCGTGGGACT CATTGTCGTC GCAGAAATCG TGTTGTGGGG AGCGGGCCAA CATTTCTGGG AGCTGGTGAT TGGCGTACAA CTCTTTTTCC TCGCCTTTAA TCTGATGGAG GCGCTGCTGC CTTCGCTTAT TAGCAAAGAA TCGCCCGCGG GGTATAAAGG AACGGCGATG GGCGTCTATT CTACCAGTCA GTTTCTTGGC GTGGCGCTTG GCGGCTCGCT GGGCGGCTGG ATAGACGGCA CGTTTGATGG GCAAACCGTT TTCCTTGCCG GGGCCGTACT GGCGATGGTA TGGCTGGCGG TGGCAAGTAC CATGAAAGAG CCGCCCTATG TCAGCAGCCT GCGTGTGGAA ATTCCAGCGG ATATCGTTGC TGACGACAGA CTAAAACAGC GACTGTTGGA AATGAAAGGC GTAAGCGAAG CGCTGATCGT GGCGGAAGAG CATTCCGCTT ACGTCAAAAT CGACAGCAAA GTGACCAATC GCTTTGAAGT TGAACAGCTT ATCAGCAAAG GATAA
|
Protein sequence | MNDYKMTPGE LRATWGLGTV FSLRMLGMFM VLPVLTTYGM ALQGASEALI GIAIGIYGLA QAIFQIPFGL LSDRIGRKPL IVGGLAVFVA GSVIAALSHS IWGIILGRAL QGSGAIAAAV MALLSDLTRE QNRTKAMAFI GVSFGITFAI AMVLGPIVTH SLGLNALFWM IAALATLGII LTIWVVPNNT NHVLNRESGM VKGSFSKVLA EPRLLKLNLG IMCLHILLMS TFVALPGQLA DAGFPAAEHW KVYLATMVIA FAAVVPFIIY AEVKRRMKQV FLFCVGLIVV AEIVLWGAGQ HFWELVIGVQ LFFLAFNLME ALLPSLISKE SPAGYKGTAM GVYSTSQFLG VALGGSLGGW IDGTFDGQTV FLAGAVLAMV WLAVASTMKE PPYVSSLRVE IPADIVADDR LKQRLLEMKG VSEALIVAEE HSAYVKIDSK VTNRFEVEQL ISKG
|
| |