Gene SeD_A0459 details

Gene Information

• Locus tag: SeD_A0459
• Symbol: nusB
• ID: 6874339
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: +
• Start bp: 474848
• End bp: 475267
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642783685
• Product: transcription antitermination protein NusB
• Protein accession: YP_002214372
• Protein GI: 198243030
• COG category: [K] Transcription
• COG ID: [COG0781] Transcription termination factor
• TIGRFAM ID: [TIGR01951] transcription antitermination factor NusB

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 101
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGAAACCTG CTGCTCGTCG CCGCGCCCGT GAGTGTGCCG TCCAGGCGCT TTACTCCTGG 
CAGTTGTCCC AGAACGACAT CGCTGATGTT GAATACCAGT TCCTGGCGGA ACAGGACGTA 
AAAGACGTCG ACGTTCTCTA TTTCCGTGAA CTGCTATCCG GGGTGGCGAC TAACAGCGCG 
TACCTGGATG GTTTAATGAA ACCGTATCTG TCCCGCCTGC TTGAAGAGCT GGGACAGGTT 
GAAAAAGCCG TGCTGCGTAT TGCGTTGTTT GAGCTGTCAA AACGCAGCGA TGTGCCTTAT 
AAAGTGGCCA TCAACGAAGC GATTGAACTG GCGAAAACCT TTGGCGCTGA AGACAGCCAC 
AAATTCGTCA ACGGCGTACT GGATAAAGCA GCTCCGGTGA TTCGTCCCAA CAAAAAGTGA 

 

Protein sequence

MKPAARRRAR ECAVQALYSW QLSQNDIADV EYQFLAEQDV KDVDVLYFRE LLSGVATNSA 
YLDGLMKPYL SRLLEELGQV EKAVLRIALF ELSKRSDVPY KVAINEAIEL AKTFGAEDSH 
KFVNGVLDKA APVIRPNKK