Gene SeD_A0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0446 
SymbolyajC 
ID6875630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp465295 
End bp465627 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content52% 
IMG OID642783673 
Productpreprotein translocase subunit YajC 
Protein accessionYP_002214360 
Protein GI198244388 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTT TTATTTCTGA TGCGGTAGCG GCAACAGGTG CTCCAGCGCA GGGCAGCCCG 
ATGTCTCTGA TTTTAATGCT GGTGGTGTTT GGTCTGATTT TCTATTTCAT GATCCTGCGC
CCGCAGCAGA AGCGCACCAA AGAGCACAAA AAGCTGATGG ACTCCATTGC GAAAGGTGAT
GAAGTTCTGA CGAATGGCGG TCTGGTCGGT CGAGTGACCA AAGTAGCGGA AGCCGGCTAC
ATTGCCATCG CGCTGAATGA CACCACGGAA GTGGTTATCA AACGTGACTT CGTAGCTGCC
GTTCTGCCGA AAGGCACCAT GAAGGCGCTG TAA
 
Protein sequence
MSFFISDAVA ATGAPAQGSP MSLILMLVVF GLIFYFMILR PQQKRTKEHK KLMDSIAKGD 
EVLTNGGLVG RVTKVAEAGY IAIALNDTTE VVIKRDFVAA VLPKGTMKAL