Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0439 |
Symbol | proY |
ID | 6874549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 457916 |
End bp | 459346 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642783668 |
Product | putative proline-specific permease |
Protein accession | YP_002214355 |
Protein GI | 198244611 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.37513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTACACCA CGGGGCTTAA CGCCCCGTGG TTTTTTATTG TGTTGATAGG TCAGAAATTG ATGGAAAGCA ATAATAAGCT AAAGCGTGGG CTGAGCACCC GGCACATTCG CTTTATGGCA TTAGGTTCGG CAATCGGCAC CGGCCTGTTT TACGGCTCGG CGGACGCCAT CAAAATGGCG GGGCCGAGCG TGCTGTTGGC CTATATTATT GGCGGGGTCG CGGCATATAT CATTATGCGC GCATTGGGGG AAATGTCCGT TCACAACCCT GCCGCCAGCT CATTTTCGCG CTATGCGCAG GAAAACCTCG GCCCGCTTGC GGGCTACATT ACCGGCTGGA CCTACTGTTT TGAGATCCTG ATCGTCGCCA TTGCCGACGT GACCGCGTTC GGCATTTACA TGGGAGTCTG GTTCCCCGCC GTGCCGCACT GGATTTGGGT ACTTAGCGTG GTGCTGATCA TTTGCGCCAT CAACCTGATG AGCGTCAAGG TGTTCGGCGA GCTGGAGTTT TGGTTCTCCT TCTTCAAAGT CGCCACCATT ATTATCATGA TTGTCGCGGG TATCGGCATC ATTGTGTGGG GAATTGGCAA CGGCGGGCAG CCGACCGGCA TTCATAACCT GTGGAGCAAC GGCGGCTTCT TCAGCAATGG CTGGCTGGGA ATGATCATGT CGCTGCAAAT GGTGATGTTC GCTTACGGCG GGATTGAGAT TATCGGTATC ACCGCCGGGG AAGCGAAAGA CCCGGAGAAA TCCATTCCGC GCGCCATTAA CTCAGTACCG ATGCGTATCC TGGTATTTTA TGTCGGCACG CTGTTCGTCA TTATGTCTAT CTATCCGTGG AATCAGGTCG GCACAAACGG CAGCCCATTT GTGCTGACGT TCCAGCATAT GGGGATTACC TTTGCCGCCA GCATTCTGAA CTTTGTGGTA TTGACCGCCT CGCTTTCCGC TATCAACTCC GATGTGTTTG GCGTAGGCCG TATGCTGCAT GGTATGGCGG AGCAGGGGAG CGCGCCGAAA GTCTTTGCCA AAACGTCACG CCGTGGTATT CCGTGGGTTA CTGTGCTGGT GATGACGATT GCGCTGCTGT TTGCGGTTTA CCTGAACTAC ATCATGCCGG AAAACGTCTT CCTGGTGATT GCCTCGCTGG CGACGTTTGC GACGGTATGG GTATGGATCA TGATCCTGCT GTCACAAATC GCCTTCCGCC GTCGTTTACC GCCGGAAGAG GTAAAAGCGC TGAAGTTTAA GGTGCCGGGC GGTGTCGTAA CGACGATAGC GGGTCTGATT TTCCTGGTCT TCATTATTGC GCTTATCGGC TACCATCCGG ATACCCGCAT CTCACTGTAT GTGGGCTTCG CCTGGATAGT TCTGCTGTTG ATTGGCTGGA TGTTTAAACG CCGTCGCGAC CGTCAATTGG CGCAGGCGTA G
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Protein sequence | MYTTGLNAPW FFIVLIGQKL MESNNKLKRG LSTRHIRFMA LGSAIGTGLF YGSADAIKMA GPSVLLAYII GGVAAYIIMR ALGEMSVHNP AASSFSRYAQ ENLGPLAGYI TGWTYCFEIL IVAIADVTAF GIYMGVWFPA VPHWIWVLSV VLIICAINLM SVKVFGELEF WFSFFKVATI IIMIVAGIGI IVWGIGNGGQ PTGIHNLWSN GGFFSNGWLG MIMSLQMVMF AYGGIEIIGI TAGEAKDPEK SIPRAINSVP MRILVFYVGT LFVIMSIYPW NQVGTNGSPF VLTFQHMGIT FAASILNFVV LTASLSAINS DVFGVGRMLH GMAEQGSAPK VFAKTSRRGI PWVTVLVMTI ALLFAVYLNY IMPENVFLVI ASLATFATVW VWIMILLSQI AFRRRLPPEE VKALKFKVPG GVVTTIAGLI FLVFIIALIG YHPDTRISLY VGFAWIVLLL IGWMFKRRRD RQLAQA
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