Gene SeD_A0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0412 
Symbol 
ID6875604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp434901 
End bp435995 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content56% 
IMG OID642783643 
Productputative outer membrane lipoprotein 
Protein accessionYP_002214330 
Protein GI198242503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.327369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.00807805 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGGCGG CGTCCCGTCT TTACCCTCTG CCTTTTCTGG CGGTCGCCAT ATTGGCTGGC 
TGTAGTAGTC AATCCGGGCA GCCGGTGAGC AAGGGCGAGA AGCCTGTCGA CGTGGCAAGC 
GTAGTACGTC AGAAAATGCC GGCCAGTGTC AAAGACAGAG AGGCCTGGGC GAAAGATATC 
GCGACAACGT TTAAGAGCCA GGGGCTGGCG CCGACGGTAG AAAATATCTG TTCGGTGCTG 
GCTGTCGCCC AGCAGGAGTC CGGTTATCAG GCGGATCCTG TCGTGCCGGG GCTAAGTAAA 
ATCGCCTGGC AGGAGATTGA TCGCCGCGCT GAACGACTAC ACATTCCGCT GTTTCTGGTG 
CACACCGCGC TGAAAATTAA CTCCCCCAAC GGCAAGAGCT ATAGCGAACG GCTGGACACG 
GTAAAAACCG AAAAACAGCT TAGCGCTATT TTTGACGACT TTATCAATAT GGTTCCTATG 
GGGCAGACGC TATTTGGCTC ATATAACCCG GTGCATACGG GCGGCCCGAT GCAGGTCAGC 
ATTGCCTTTG CCGAACAGCA CGCGAAAGGT TATCCGTGGA AGATGACGGG TACGGTACGT 
CAGGAGGTCT TTACGCGCCG TGGCGGGTTG TGGTTTGGAA CCTACCATTT GCTGAATTAC 
CCGGCGAACT ACAGCGCGCC TGTTTTCCGC TTCGCCGACT TCAACGCGGG ATGGTACGCC 
AGCCGTAACG CTGCGTTCCA GAATGCCGTC AGTAAAGCCA GTGGGGTAAA ACTGGCGCTG 
GATGGCGATC TGATTCGTTA TAACAGCAAG GAACCGGGCA AAACAGAGTT AGCGGTACGC 
AAACTGGCAG GGCAGTTGGG AATGAGTGAG CGTGAAATTC GCAGCCAACT GGAGAAAGGC 
GATAGCCTGG CGTTTGAAAA AACGGCGCTC TACAAGAAAG TCTATAAACT GGCCGAGGCC 
AAAACGGGCA AGACGCTTGC GCGGGAAATG TTGCCCGGTA TTCAACTGGA AAGCCCGAAG 
ATCACGCGCA AGCTGACGAC CGCCTGGTTT GCTAAACGAG TTGATGAGCG GCGGGCGCGG 
TGTATGGGGC GATAA
 
Protein sequence
MSAASRLYPL PFLAVAILAG CSSQSGQPVS KGEKPVDVAS VVRQKMPASV KDREAWAKDI 
ATTFKSQGLA PTVENICSVL AVAQQESGYQ ADPVVPGLSK IAWQEIDRRA ERLHIPLFLV 
HTALKINSPN GKSYSERLDT VKTEKQLSAI FDDFINMVPM GQTLFGSYNP VHTGGPMQVS 
IAFAEQHAKG YPWKMTGTVR QEVFTRRGGL WFGTYHLLNY PANYSAPVFR FADFNAGWYA 
SRNAAFQNAV SKASGVKLAL DGDLIRYNSK EPGKTELAVR KLAGQLGMSE REIRSQLEKG 
DSLAFEKTAL YKKVYKLAEA KTGKTLAREM LPGIQLESPK ITRKLTTAWF AKRVDERRAR 
CMGR