Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0389 |
Symbol | |
ID | 6873325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 406724 |
End bp | 408682 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642783623 |
Product | type III restriction-modification system StyLTI enzyme mod |
Protein accession | YP_002214310 |
Protein GI | 198243123 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2189] Adenine specific DNA methylase Mod |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 1.57999e-20 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTTGAAAG ATAACCAAAA ACACAACGAG TCTGTTGCCC CGAATAGCGC CTTTCTGTCT GAGTTACAAC GTGCATTACC GGAATTTTTT ACCGCCGATC GCTATAACGA GCAGGGCGAA CTGATCGCGA AAGGCGGATT TGATCTCGCC AGATTTGAGC GCGCGCTGAA AGCGCGTAAT ATTGATGAGC TGACTAGCGG TTATCAGATT GATTTTATTG GCAAAGATTA CGCAAAAAAA CAGGCGGGTG AAAAATCCGT TACCGTTATC GTTCCTGACG TGGAACACAA TACTCTGGCA GAAAATAAAA ACAGCCATAA TCTTTTTCTG ACCGGAGATA ATCTGGATGT TTTACGCCAT CTGCAAAATA ATTACGCCGA TACCGTCGAT ATGATCTATA TCGATCCCCC TTATAACACC GGATCGGACG GGTTTGTCTA TCCCGATCAT TTTGAATATA GCGATCGGGC GTTGCAGGAT ATGTTTGGTC TTAATGATAC CGAACTGGCA CGTTTAAAAT CCATTCAGGG TAAATCGACG CACTCCGCGT GGTTATCTTT CATGTATCCG CGTCTTTTCC TGGCCAGGAA GCTCCTGAAA GATACCGGAT TTATTTTTAT CTCTATCGAC GATAATGAGT ACGCCAATCT TAAATTAATG ATGGATGAGA TTTTTGGCGA AGGCGGATTT GTCACCAATG TGATGTGGAA GCGCAAAAAA GAGATTTCTA ACGACTCTGA TAACGTTTCC ATCCAGGGGG AATACATTCT TGTTTACGCC AAAACCGGTC AGGGCGCTTT ACGTTTAGAA CCGCTTTCTA AAGAGTATAT TCAGAAATCC TATAAAGAAC CGACCGAACA GTTTCCAGAA GGGAAATGGC GGCCGGTGCC GTTAACGGTG TCAAAAGGGC TGAGCGGCGG CGGCTATACC TATAAAATTA CCACGCCGAA CGGTACGGTA CACGAAAGAC TATGGGCTTA TCCTGAAGCC AGTTACCAAA AACTGGTGGC CGATAATCTG GTCTATTTTG GCAAAGATAA CGGCGGTATT CCCCAGCGAG TCATGTACGC GCATCACAGT AAGGGGCAGC CAACGACCAA TTACTGGGAT AACGTAGCGT CGAATAAAGA GGGGAAAAAG GAGATTCTGG ATCTCTTCGG CGACAACGTT TTTGATACGC CGAAACCGAC CGCATTATTG AAGAAAATCA TCAAGCTCGC TATCGATAAA GACGGCGTCG TCCTGGACTT TTTTGCCGGT TCCGGCACTA CGGCCCATGC GGTAATGGCG CTGAATGAAG AAGATGGGGG GCAGCGCACG TTTATTCTGT GTACTATCGA TCAGGCATTA AGCAATAACA CTATCGCGAA AAAAGCAGGT TATAACACTA TTGATGAAAT CAGCCGCGAG CGAATTACAC GCGTTGCGGC GAAGATCCGC GCCAACAATC CCGCGACCAA TAGCGATCTC GGTTTTAAAC ATTATCGTTT TGCCACTCCG ACACAGCAGA CGCTGGACGA TCTGGATAGC TTCGATATTG CTACCGGCCA TTTTATCAAT ACCAGCGGTC AACTGGCCGC TTTCACCGAG TCAGGATTTA CCGACATGAT CAATCCTTTT TCCGCCAGAG GATTGGGCGT GCCGGGCGGC GCAAGCGGCG AAGAGACCTT ATTAACGACA TGGCTGGTCG CCGATGGTTA TAAAATGGAT ATTGACGTAC AGACCGTTGA TTTTTCCGGC TATTGCGCCA GGTATGTTGA TAATACGCGC CTGTATCTGA TTGATGAACG ATGGGGAACA GAGCAGACCC GCGATCTTCT CAACCACATT GGTACGCACC AGCTTCCGGT TCAGACCATT GTCATTTACG GCTACTCTTT CGACCTTGAA TCCATTCGTG AACTGGAAAT CGGCTTAAAA CAGCTTGATC AAAAAGTGAA CCTGGTGAAG CGTTATTAA
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Protein sequence | MLKDNQKHNE SVAPNSAFLS ELQRALPEFF TADRYNEQGE LIAKGGFDLA RFERALKARN IDELTSGYQI DFIGKDYAKK QAGEKSVTVI VPDVEHNTLA ENKNSHNLFL TGDNLDVLRH LQNNYADTVD MIYIDPPYNT GSDGFVYPDH FEYSDRALQD MFGLNDTELA RLKSIQGKST HSAWLSFMYP RLFLARKLLK DTGFIFISID DNEYANLKLM MDEIFGEGGF VTNVMWKRKK EISNDSDNVS IQGEYILVYA KTGQGALRLE PLSKEYIQKS YKEPTEQFPE GKWRPVPLTV SKGLSGGGYT YKITTPNGTV HERLWAYPEA SYQKLVADNL VYFGKDNGGI PQRVMYAHHS KGQPTTNYWD NVASNKEGKK EILDLFGDNV FDTPKPTALL KKIIKLAIDK DGVVLDFFAG SGTTAHAVMA LNEEDGGQRT FILCTIDQAL SNNTIAKKAG YNTIDEISRE RITRVAAKIR ANNPATNSDL GFKHYRFATP TQQTLDDLDS FDIATGHFIN TSGQLAAFTE SGFTDMINPF SARGLGVPGG ASGEETLLTT WLVADGYKMD IDVQTVDFSG YCARYVDNTR LYLIDERWGT EQTRDLLNHI GTHQLPVQTI VIYGYSFDLE SIRELEIGLK QLDQKVNLVK RY
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