Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0374 |
Symbol | |
ID | 6871137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 390527 |
End bp | 392077 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642783608 |
Product | cyclic diguanylate phosphodiesterase (EAL) domain-containing protein |
Protein accession | YP_002214295 |
Protein GI | 198244806 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.0285785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTTTA TTGCCGTTCC ACTGATCGTA ATGATATTGG TGGGGTTACT CGCGGGTATC TTCCAGCTAA AACGAGATAT CGCCGTCAGC GCCAATACGC TGCTGCGGTT TAGCGCGGAT ATATCTGCCG CCTCCTGGCA AGTCGCCGGA AAAGCCGCCA GACTGGCTGA GAGTTCCTGC ACTGATACGC TGAAAGAACT GTCCAGAACG CGGGCCTTCA CTCCTTATGT CCGTGACATT GGGTTTCTGG AAAATGGTGA TATCACTTGC TCCTTTGTCA CAGGAACCGA ACGCTATCAT TTTTCCCGGC TGGCAGGGCT TTCCTTACCT GCTTCTTATC CGGAACGGTG GTTGCGATCT ATCGGTAGTA TGGCCGAAGG ACCCGATCGC CTTGTTGTGG TTTATGTGAA AAAAGTAGCA GCGAATAAAG CGGCTTTCGT CATTGTGGAT TCGCAGTATG TCCAGGAGCT CATGGAGATA TTGGCAGCAG AGAGAGCATC AGCCTTTAGC CTGACATTCG GCGCAGGGGA GGCGATTACC AGCGCTGCGA CGTTGCGCGG TAAGGCGTTT TTAACGCAGC GGTTCACCTC AACCGATCAC ACTATCCAGC TGATGGTGCG AACCCCTTTC TCAACGTTAT CGGCATACTG GTTACAAAAC CTTTTTATTT TTATTCCGCT GTCATTATGT CTTTCTGTAG GGATGATGTT GTTCTACAGG CGCTGGTATT TAAAACGCTT ATCTCTGGCC CGGGAGATTG CCAGGGGAAT AACGCACAAT GAATTTACGG TATATTATCA ACCTGTTTTT AATGTTAAAG ACGGTAGTTG CGGCGGCGTG GAGGCGCTAA TGCGCTGGCC GCAACCGGAT GGCCGTTTTA TAACTCCCGA TATTTTTATT ACCGCCGCAG AAAATGAAGG CATGATTATT CCACTCTCTC GTCATCTGTT CGAACTGATT GCTCATGACG TGATAAACTG GACTGTACCG GATGATTTCT ATATCAGCGT AAATATATCG CCTGCGCATC TTATGGATGA CGGTTTTATA CAAGATATAG AGGCGCTCAG GACTCGTTTG GGAACGATAA CGCTTATGTT GGAGCTCACC GAACGTAGCC TGATTGTAGA ACCTTCACAG GTCGCAGAAA AACTTTCAAC GCTCCGTGAA AAAGGCGTGT TAATAGCGAT TGATGATTTT GGGACCGGCT ATTGCTCCCT CTCCTATCTC CAGCAATTAC CTGTAGACTC TCTTAAAATA GACAGAACGT TTATCGATAC CATTGATACC AGCAGCGATG ATGTTCCTGT CCTGGATACT ATCATCACGC TGAGTCAGCG ACTGGGGCTT AATGTGGTTG CCGAAGGGGT CAGTACCCAG CACCAATTGC GTTATATCTT AAGCCACGGG GTAGGATTCG TTCAGGGATT TCTTTATGCC AGGCCGATGG AGGCTAATGA CTTTATGAGC TGGCTTGGCA AGTCAGCCCA GAGGCAAAAT GGTCTGCTCA AGGGGGAAAA CGAATCTGCG AGTGGCCTGG TGGCTGAATA A
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Protein sequence | MLFIAVPLIV MILVGLLAGI FQLKRDIAVS ANTLLRFSAD ISAASWQVAG KAARLAESSC TDTLKELSRT RAFTPYVRDI GFLENGDITC SFVTGTERYH FSRLAGLSLP ASYPERWLRS IGSMAEGPDR LVVVYVKKVA ANKAAFVIVD SQYVQELMEI LAAERASAFS LTFGAGEAIT SAATLRGKAF LTQRFTSTDH TIQLMVRTPF STLSAYWLQN LFIFIPLSLC LSVGMMLFYR RWYLKRLSLA REIARGITHN EFTVYYQPVF NVKDGSCGGV EALMRWPQPD GRFITPDIFI TAAENEGMII PLSRHLFELI AHDVINWTVP DDFYISVNIS PAHLMDDGFI QDIEALRTRL GTITLMLELT ERSLIVEPSQ VAEKLSTLRE KGVLIAIDDF GTGYCSLSYL QQLPVDSLKI DRTFIDTIDT SSDDVPVLDT IITLSQRLGL NVVAEGVSTQ HQLRYILSHG VGFVQGFLYA RPMEANDFMS WLGKSAQRQN GLLKGENESA SGLVAE
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