| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0330 |
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| Symbol | |
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| ID | 6874032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 347186 |
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| End bp | 349696 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642783568 |
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| Product | outer-membrane fimbrial usher protein |
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| Protein accession | YP_002214256 |
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| Protein GI | 198245015 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.428849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.361792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA AACAACCTGC CTTGCTACTG TTCATCGCGG GAGTGGTTCA TTGCGCAAAT
GCGCACGCTT ACACATTCGA TGCATCAATG TTGGGCGATG CAGCGAAAGG GGTTGATATG
TCGCTCTTTA ACCAGGGGGT ACAACAGCCA GGGACTTATC GAGTGGACGT GATGGTGAAT
GGTAAACGTG TCGACACCCG TGATGTGGTG TTCAAATTGG AAAAGGATGG GCAAGGAACG
CCTTTTCTGG CTCCTTGTTT GACGGTCAGT CAGCTTTCAC GCTACGGCGT AAAAACGGAA
GATTACCCTC AGTTGTGGAA AGCAGCAAAG ACCCCAGATG AGTGTGCGGA TCTGACCGCC
ATTCCACAGG CTAAAGCGGT ACTGGATATC AATAATCAGC AACTGCAACT GAGTATTCCT
CAGGTGGCGT TGCGTCCGGA ATTTAAGGGG ATCGCTCCTG AAGATCTCTG GGATGATGGT
ATTCCGGCGT TTCTGATGAA CTACAGTGCG AGGACAACGC AGACGGATTA CAAAATGGAT
ATGGAGAGGC GTGACAACTC TTCCTGGGTA CAACTGCAAC CGGGAATCAA TATAGGTGCG
TGGCGTGTCC GCAATGCGAC CAGCTGGCAG CGGAGTGGTC AACTGTCGGG GAAGTGGCAG
GCAGCATATA CCTATGCTGA GCGTGGACTG TACTCACTAA AAAGTCGTCT GACTCTGGGG
CAAAAGACTT CGCAGGGGGA GATATTTGAT AGTGTGCCAT TTACCGGTGT GATGTTGGCA
TCGGATGACA ACATGGTGCC CTACAGTGAG CGGCAGTTTG CTCCGGTAGT GCGTGGGATT
GCCCGCACGC AGGCTCGGGT GGAGGTCAAA CAGAATGGTT ACACCATTTA CAACACCACC
GTGGCGCCCG GACCGTTTGC ACTGCGGGAT CTGTCGGTAA CAGACAGTAG TGGTGATCTG
CATGTCACCG TGTGGGAGGC CGATGGCAGT ACACAAATGT TTGTGGTGCC GTATCAGACC
CCGGCGATAG CACTGCACCA GGGATATTTG AAGTACAGCC TGTTGGCGGG CCGATACCGA
TCGTCAGACT CTGCAACGGA TAAGGCGCAG ATCGCGCAGG CTACGTTGAT GTATGGTCTG
CCGTGGAATC TCACTGCATA CGGCGGTATA CAGAGTGCAA CGCACTATCA AGCTGCATTG
CTTGGTTTGG GGGGATCTCT CGGGCGGTGG GGGAGTTTAT CTGTCGATGG AAGCGACACA
CACAGTCAGC GTCAGGGGGA GGCGGTACAG CAAGGAGCCT CCTGGCGACT GCGTTACAGC
AACCAGCTGA CTGCGACGGG GACAAATTTT TTTCTGACGA GATGGCAGTA TGCCTCGCAG
GGCTATAACA CCCTATCCGA TGTGCTCGAC AGTTATCGAC ATGATGGCAA CCGTCTATGG
TCGTGGCGGG AAAATTTGCA GCCGAGCTCG CGTACTACCC TGATGTTGAG CCAGTCATGG
GGGAGGCATT TGGGCAATCT GAGTTTAACC GGTTCCCGTA CCGACTGGCG TAATCGCCCC
GGTCATGATG ACAGCTACGG ACTGAGTTGG GGAACCTCTA TCGGAGGGGG CTCGCTGTCA
TTGAACTGGA ATCAAAACAG AACGCTGTGG CGCAATGGCG CGCACCGTAA AGAGAACATA
ACCAGCCTGT GGTTCAGTAT GCCATTAAGC CGCTGGACGG GGAATAATGT AAGTGCTAGT
TGGCAGATGA CTTCACCATC ACACGGTGGT CAGACGCAAC AAGTGGGGGT CAACGGAGAG
GCATTCAGTC AGCAACTGGA TTGGGAGGTG CGTCAGAGTT ACCGTGCCGA TGCCCCGCCA
GGTGGTGGTA ATAACAGCGC ATTGCACTTG GCATGGAATG GGGATTACGG CCTGTTAGGT
GGTGACTATA GCTACAGCCG GGCGATGCGC CAGATGGGAG TCAATATCGC GGGAGGTATA
GTTATCCACC ATCATGGTGT GACGCTGGGG CAACCTTTGC AAGGCTCAGT GGCGCTGGTT
GAAGCGCCAG GGGCCTCGGG GGTGCCAGTT GGCGGCTGGC CTGGCGTTAA GACGGATTTT
CGTGGCGACA CCACAGTGGG CAACCTGAAC GTCTATCAGG AGAATACAGT CAGCCTCGAT
CCGTCGCGAC TACCGGATGA CGCAGAGGTC ACACAAACCG ATGTGCGCGT GGTGCCAACC
GAAGGGGCGG TGGTGGAAGC GAAGTTTCAC ACTCGCATCG GGGCCAGGGC ACTGATGACG
CTGAAACGGG AAGATGGTAG CGCCATTCCT TTCGGGGCGC AGGTTACAGT CAATGGGCAG
GATGGCAGTG CTGCTCTGGT GGATACTGAT AGCCAGGTTT ATCTCACTGG TTTGGCGGAT
AAGGGCGAAC TGACGGTGAA ATGGGGAGCA CAGCAATGTC GGGTTAACTA CCACCTACCT
GCCCACAAGG GAATCGCGGG CTTGTATCAA ATGAGCGGTC TCTGCAGATA A
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| Protein sequence | MKFKQPALLL FIAGVVHCAN AHAYTFDASM LGDAAKGVDM SLFNQGVQQP GTYRVDVMVN
GKRVDTRDVV FKLEKDGQGT PFLAPCLTVS QLSRYGVKTE DYPQLWKAAK TPDECADLTA
IPQAKAVLDI NNQQLQLSIP QVALRPEFKG IAPEDLWDDG IPAFLMNYSA RTTQTDYKMD
MERRDNSSWV QLQPGINIGA WRVRNATSWQ RSGQLSGKWQ AAYTYAERGL YSLKSRLTLG
QKTSQGEIFD SVPFTGVMLA SDDNMVPYSE RQFAPVVRGI ARTQARVEVK QNGYTIYNTT
VAPGPFALRD LSVTDSSGDL HVTVWEADGS TQMFVVPYQT PAIALHQGYL KYSLLAGRYR
SSDSATDKAQ IAQATLMYGL PWNLTAYGGI QSATHYQAAL LGLGGSLGRW GSLSVDGSDT
HSQRQGEAVQ QGASWRLRYS NQLTATGTNF FLTRWQYASQ GYNTLSDVLD SYRHDGNRLW
SWRENLQPSS RTTLMLSQSW GRHLGNLSLT GSRTDWRNRP GHDDSYGLSW GTSIGGGSLS
LNWNQNRTLW RNGAHRKENI TSLWFSMPLS RWTGNNVSAS WQMTSPSHGG QTQQVGVNGE
AFSQQLDWEV RQSYRADAPP GGGNNSALHL AWNGDYGLLG GDYSYSRAMR QMGVNIAGGI
VIHHHGVTLG QPLQGSVALV EAPGASGVPV GGWPGVKTDF RGDTTVGNLN VYQENTVSLD
PSRLPDDAEV TQTDVRVVPT EGAVVEAKFH TRIGARALMT LKREDGSAIP FGAQVTVNGQ
DGSAALVDTD SQVYLTGLAD KGELTVKWGA QQCRVNYHLP AHKGIAGLYQ MSGLCR
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