| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0317 |
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| Symbol | |
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| ID | 6872593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 337906 |
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| End bp | 340680 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642783558 |
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| Product | Rhs family protein |
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| Protein accession | YP_002214246 |
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| Protein GI | 198244314 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.325486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.374096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGC ACCGGGAGCC GGGCGGCGAA CGGTATTACT ACACCTGGGC GTGGTTTGAA
GGCCCGGACG ATGCGGCGTG GCGGGTGACG GGCCATCATA CGGACAGCGG CGAGCAGTAT
CGTCTGGACT GGAATCTGGC AGAACGTTCG CTGTGCGTGA CGGATAGTCT GGGGCGTACG
CGCTGCCACT GGTGGGATGC GCAGGGCCTG GTGACGGCGT ACCGGGACGA GGCCGGGCAG
ATGACCACTT TCCGCTGGAG CGATGAAGAG CGGTTACTGC TGGGGATGAC GGACGCGCAG
GGCGGCAAAT GGCGTTATGT CTATGACCGT CTCGGCCACC TGACGGAGAC GCATGACCCG
CTGGGCCGGG TTGAGCAGAC GCAGTGGCAT CCGGTGTGGC ACCAGCCGGA AACGGAGGTG
GATGCCGCGG GGGCGGCGTG GCGTTATGAG TATGATGAGC GGGGCAACCT GCAGGCGGTC
AGCGACCCGC TGCACCAGCG CACGGTATAC GGGTATGACC GGCACGGCCA GGTGGTGCGG
ATAACCGACG CGCGGGGCGG AGATAAATAC CTGCAGTGGA ACGAAGACGG GCAGCTTATG
CGCCACACGG ACTGTTCTGG CTCGCAGACG GCATGGTTTT ATGATGAACG CACGCGGCTG
GAAAGGGTGA CGGACGCGGA GAGTAACAGT ACGCGTTACA GCTATGACGG CAACGGACAT
CTGACGGAGG TCATGTTCGC GGACGGGCGT ACGGAGCGTT ACCAGCCGGA TGCGGCGGGA
CGGCTGGTGA AATACACCAG CCCGGCGGGG CAGATAACAC GCTGGCAGCG GGACGGCCAG
GGGCGGGTGC GCAGGCAGAC GGATGCGACG GGTCGCAGGA CGGCGTATGA GTACGACGCT
TACGGGCGGC TGACCACGCT CACGAACGAG AACGGGGAAA GCTACCGGTT CCGGTACGAT
GTTCTGGGCC GGGTGACGGA ACAGACGGAC CCCGGCGGCA GCCGCCGGGT ATACGGGTAT
AACGCGCTGA ATGCGGTGAC GGCAGTGATA TACGGCGGGG AGCGCGGGGG CGAAATCCGC
CACGGTCTGG AGCGTGATGC GGCGGGGAGG CTGACGGCGA AAATCACGCC GGAGACGCGC
ACGGAATACC GGTACGACGC GGCGGACCGT CTGCTGGAAA TCCGCCGCAG GCAGCATGAT
GCGGCGGAAG GCGGAGAGCC GGAAGTTATC CGGTTCAGCT ACGACAGTGC GGGTAACCTG
CTGAGCGAGG AGACGGCGCA GGGCGTGCTG CAGAACCGGT ACGATGTTCA GGGCAACCGC
ACAGAAACGC AGATGCCGGA TGGGCGGACG CTGCGGTACC TGTACTACGG GAGCGGCCAT
CTCCAGCAAA TCAACCTGGG GCGTGATGTC ATCAGCGAGT TCACGCGTGA CCACCTGCAC
CGTGAGGTGC AGCGGAGCCA GGGGCGGCTG GACACGCGGC GGATGTACGA CCGGACGGGC
CGGTTAACGC GGAAACTGAC CTGTAAAGGA ATGCGCGGTG TGGTGCCGGA GACGTTTATC
GACCGGGAAT ATGCGTACAG CGGCCAGGAT GAGCTGCTGA AAAAGCGGCA CAGCCGGCAG
GGGGTGACGG ATTATTTTTA CGACACGACG GGGCGCATCA CGGCGTGCCG GAATGAGGCA
TACCTGGACA GCTGGCAGTA CGACGCGGCG GCGAACCTGC TGGACAGGCG GCAGGGAGAG
ACCGCGCAGG CGGGTGCAGG CAGCGTGGTG CCGTTCAACC GGATAACGTC ATACCGTGGG
CTGCATTACC GTTACGATGA ATATGGCCGG GTTGTGGAAA AGCGGGGCCG CAACGGCACG
CAGCACTACC GCTGGGACGC GGAGCACCGG CTGACGGAAG TGGCGGTCAC CCGGGGGGAC
ACCGTACGGC GTTACGGGTA CGTGTACGAC GCGCCGGGCA GGCGGGTGGA GAAGCACGAG
CTGGACGCGG AAGGAAAGCC GTATAACCGG ACGACGTTTT TATGGGACGG AATGCGGCTG
GCACAGGAGT GCAGGCTGGG AAGAAGCAGC AGCCTGTATA TCTACAGCGA CCAGGGGAGC
CACGAGCCGC TGGCGCGGGT GGACAGGGCG GCGCCGGGCG AAGCGGATGA GGTGCTGTAT
TACCATACGG ACGTAAACGG CGCGCCGGAG GAGATGACGG ACGGCGGGGG CAATATTGTC
TGGGAAGCGG GCTATCAGGT ATGGGGGAAC CTGACGCATG AAAAAGAAAC CCGGCCCGTA
CAGCAGAACC TGCGTTTCCA GGGGCAATAT CTGGACAGGG AAACGGGGCT GCATTACAAT
TTGTACAGAT TTTATGATCC GGATATCGGG AAGTTTATAT CGGGCGATCC AATCTCGCTG
AAGGGTGGAA TAAACTTATA TGCGTATGCA CCGAATCCTC TGTCATGGAT CGATCCTTTA
GGTCTTAAAT GTGGATCTTC GTATGAGCAG GCCAGAAATA AAGCCCTCAA ATGGTTAGAA
GAACGTGGAT TTAAAGCGGA GAGAGTTAAT ATAGGTAAGT TCGGTTCGAC AAGAGGAAAA
CCTGTAGGAA TGACAACCGC CGATGGCAAA ACAGGATTTA GGATCGAATA TGATGAACGA
AGTGGTGCCC ATATTAATGT CTTCAGTGGA AAGGATAAAG GCGAACATTT CTTATTTGAT
GCAAGTGAAT CTATCGTAAC AAAACTCCAA AAATTATTTG ATCTTCCATC CAAACCTCAA
AGGCCAATAT CATGA
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| Protein sequence | MTMHREPGGE RYYYTWAWFE GPDDAAWRVT GHHTDSGEQY RLDWNLAERS LCVTDSLGRT
RCHWWDAQGL VTAYRDEAGQ MTTFRWSDEE RLLLGMTDAQ GGKWRYVYDR LGHLTETHDP
LGRVEQTQWH PVWHQPETEV DAAGAAWRYE YDERGNLQAV SDPLHQRTVY GYDRHGQVVR
ITDARGGDKY LQWNEDGQLM RHTDCSGSQT AWFYDERTRL ERVTDAESNS TRYSYDGNGH
LTEVMFADGR TERYQPDAAG RLVKYTSPAG QITRWQRDGQ GRVRRQTDAT GRRTAYEYDA
YGRLTTLTNE NGESYRFRYD VLGRVTEQTD PGGSRRVYGY NALNAVTAVI YGGERGGEIR
HGLERDAAGR LTAKITPETR TEYRYDAADR LLEIRRRQHD AAEGGEPEVI RFSYDSAGNL
LSEETAQGVL QNRYDVQGNR TETQMPDGRT LRYLYYGSGH LQQINLGRDV ISEFTRDHLH
REVQRSQGRL DTRRMYDRTG RLTRKLTCKG MRGVVPETFI DREYAYSGQD ELLKKRHSRQ
GVTDYFYDTT GRITACRNEA YLDSWQYDAA ANLLDRRQGE TAQAGAGSVV PFNRITSYRG
LHYRYDEYGR VVEKRGRNGT QHYRWDAEHR LTEVAVTRGD TVRRYGYVYD APGRRVEKHE
LDAEGKPYNR TTFLWDGMRL AQECRLGRSS SLYIYSDQGS HEPLARVDRA APGEADEVLY
YHTDVNGAPE EMTDGGGNIV WEAGYQVWGN LTHEKETRPV QQNLRFQGQY LDRETGLHYN
LYRFYDPDIG KFISGDPISL KGGINLYAYA PNPLSWIDPL GLKCGSSYEQ ARNKALKWLE
ERGFKAERVN IGKFGSTRGK PVGMTTADGK TGFRIEYDER SGAHINVFSG KDKGEHFLFD
ASESIVTKLQ KLFDLPSKPQ RPIS
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