Gene SeD_A0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0303 
Symbol 
ID6874746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp320393 
End bp321697 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content60% 
IMG OID642783546 
Producthypothetical protein 
Protein accessionYP_002214234 
Protein GI198245916 
COG category[N] Cell motility
[S] Function unknown 
COG ID[COG1360] Flagellar motor protein
[COG3455] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03349] type IV / VI secretion system protein, DotU family
[TIGR03350] type VI secretion system OmpA/MotB family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.459512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA GTACCCTGAC GCCGCCAGCG GCGGACATGA TGTCCTTTTT GTCCACCACG 
CCGGAGCATA AGGACAGTGA ATATGAAACG CCGGTACACA CCAGCCAGCG CACGGAACTC
AATGTCATCG TTGAAGACGG TCCGGACAGC AAACTTCGGC TGGCTGAAAT CAGCGCGGCG
GCTAACCCGT TGCTCGCCGC TGCCCGGCCT TTATTGTGCG CTCTCGCAGC CATGCCCGCT
AAACTGGATG CGGCCCTGGT AGAGCCTTAC CGTAATCTGC TGGTACGCGA GATGCATCTG
TACCAGACAT TATGCGATCA GGCGAACCTG CGGCGCGAGC ACGTACTGGC GGTACGTTAC
TGCCTGTGTA CGGTGCTTGA TGAAGCCGCC AATAACACAA CCTGGGGACG GCGCGGCGTC
TGGGCCGGAA AAAGCCTGCT GGTAACATTT CATGGTGAAA GCGAAGGCGG GATAAAACTT
TTCCAGATCA TCGGGCGTCT GGCGGCCAGC TTCCAGGAAC ATGGCAACGT ACTGGAGGTT
ATCTACCACC TGCTGGGGCT GGGATTTGAA GGCCGCTACA GCGTGCAGCC AGACGGGCGT
AAGCAACTGG ACAATATTCG TCAGCAACTG CTGACACAGC TTTCACAGCG TCGCGATCCG
GTCATGCCCG CGCTCTCGCC TGACTTTCAG GGGGCGATAA GCGGACGACT GCGGCGGATG
CGCCGGGTGC CGGTCTGGCT GAGCGCCGGG ATAGCCCTGT TGGCGATGCT GACGCTGTTT
GGCCTTTACA GCCACCGGAT GGATGTGCAG ACCGTCACCG TACAACAGCA TATTGATGCG
ATTGGTATAA AACTGCCGCC GCCGCCCGTG CCGGTTCATA AGCTGCGGCT GAAAATCCTG
CTGGCAAACG AAATCGCCCG TGGCCTGCTG ACCGTGGACG AAGATGACCA GCACAGTAGG
GTGGTCTTCC GTGGCGACGC CATGTTTGTG CCGGGACAGA AAACGGTGAG TGACGCAATC
CGGCCAGTGA TTAACAAAGC GGCGCGGGAA ATCGCCCGCG TGGGCGGCGC AGTCACTGTA
ACGGGTCACA CTGACAGCCA GCCCATTCAT TCGGCTGAAT TCCCATCCAA CCTGGTGCTG
TCGGAAAAAC GGGCGGCGGA AGTTGCGGCG TTGCTGACCT CCGGCGGCGT ACCTGCCGGA
CGGGTACATA TCGTCGGCAA GGGCGATACG GTGCCGGTGG CGGATAACGG CAGTAAAGCC
GGGCGGGCGA AAAACCGTCG GGTGGAAATT CTGGTAGTGG AGTGA
 
Protein sequence
MTDSTLTPPA ADMMSFLSTT PEHKDSEYET PVHTSQRTEL NVIVEDGPDS KLRLAEISAA 
ANPLLAAARP LLCALAAMPA KLDAALVEPY RNLLVREMHL YQTLCDQANL RREHVLAVRY
CLCTVLDEAA NNTTWGRRGV WAGKSLLVTF HGESEGGIKL FQIIGRLAAS FQEHGNVLEV
IYHLLGLGFE GRYSVQPDGR KQLDNIRQQL LTQLSQRRDP VMPALSPDFQ GAISGRLRRM
RRVPVWLSAG IALLAMLTLF GLYSHRMDVQ TVTVQQHIDA IGIKLPPPPV PVHKLRLKIL
LANEIARGLL TVDEDDQHSR VVFRGDAMFV PGQKTVSDAI RPVINKAARE IARVGGAVTV
TGHTDSQPIH SAEFPSNLVL SEKRAAEVAA LLTSGGVPAG RVHIVGKGDT VPVADNGSKA
GRAKNRRVEI LVVE