| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0300 |
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| Symbol | |
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| ID | 6873695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 317961 |
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| End bp | 318446 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642783543 |
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| Product | hemolysin-coregulated protein |
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| Protein accession | YP_002214231 |
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| Protein GI | 198244078 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.550474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTATG ACATTTTTTT GAAAATTGAC GGCATTGACG GCGAGTCAAT GGATGACAAA
CACAAAAATG AAATTGAAGT ACTGGGCTGG CGCTGGAATA TTCATCAGGA ATCCACCATG
CACGCCGGTA GTGGCCTCGG CTCCGGTAAG GTCTCTGTCA CTAATCTGGA ATTCGAGCAT
TATATCGATC GCGCCAGCCC GAATCTGTTC AAATACTGTG CCTCCGGTAA GCACATTCCG
CAGGCCATTC TGGTTATGCG TAAGGCTGGC GGCAACCCGT TGGAGTACCT CAAGTACACC
TTTACCGATC TGATCGTTGC GGTCGTTTCA CCTAGCGGTA ACAGAGAAGG CGAAATCGCG
TCTCGCGAGC GGATTGAGCT CTCCTTCAGC ATCGTGAAGC AGGAATACGT GGTGCAGAAC
CAGCAGGGTG GCAGCGGCGG CACCATCACC GCAGGCTACG ACTTCAAGGC CAACAAAGAA
ATTTAA
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| Protein sequence | MAYDIFLKID GIDGESMDDK HKNEIEVLGW RWNIHQESTM HAGSGLGSGK VSVTNLEFEH
YIDRASPNLF KYCASGKHIP QAILVMRKAG GNPLEYLKYT FTDLIVAVVS PSGNREGEIA
SRERIELSFS IVKQEYVVQN QQGGSGGTIT AGYDFKANKE I
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