Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0292 |
Symbol | |
ID | 6875576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 309412 |
End bp | 309906 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642783535 |
Product | hypothetical protein |
Protein accession | YP_002214223 |
Protein GI | 198241906 |
COG category | [S] Function unknown |
COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.871177 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGT CTCGTTTTAC ACCCGCTAAC CACCTGCTGC CTACGCTGTT TGATCGGCTG TGTGACAATG CTCCGTATCA GAAAATTGAC CGGGATATCA GCGTCACGCC GGTACAACTG AAGGAGATCA TTCGTCGGGA TCTCTCCTTT TTGCTCAATA CCATTAGCCA CGAGGGTGAC ATCGACGCCC GGCGCTATCC GCAGGCGGCG GCGTCAGTGC TCAACTATGG CCTGCCGCCG CTGGCGGGCA GCTTTATGTA TGAGCATAAG TGGGACGATA TCAGCGAGGC GATCCGGCGC GCCATTATCC GTTTCGAACC CCGGCTGAAC GCCGCCACAC TCAGGGTCAC GCCATTGCTC GATAAAACCC GGCAGGGTAG CTATAACACG CTACAGTTTG AAATTCGCGG ACAAATTCTG ACGCAGCCGT ATCCCACGGA GTTTCTGGTA CGCAGCGCGC TGGATATGGA GCTGAGCCGC ATTACGTTCT TTTAA
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Protein sequence | MSTSRFTPAN HLLPTLFDRL CDNAPYQKID RDISVTPVQL KEIIRRDLSF LLNTISHEGD IDARRYPQAA ASVLNYGLPP LAGSFMYEHK WDDISEAIRR AIIRFEPRLN AATLRVTPLL DKTRQGSYNT LQFEIRGQIL TQPYPTEFLV RSALDMELSR ITFF
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