Gene SeD_A0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0292 
Symbol 
ID6875576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp309412 
End bp309906 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content56% 
IMG OID642783535 
Producthypothetical protein 
Protein accessionYP_002214223 
Protein GI198241906 
COG category[S] Function unknown 
COG ID[COG3518] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03357] type VI secretion system lysozyme-related protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.871177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGT CTCGTTTTAC ACCCGCTAAC CACCTGCTGC CTACGCTGTT TGATCGGCTG 
TGTGACAATG CTCCGTATCA GAAAATTGAC CGGGATATCA GCGTCACGCC GGTACAACTG
AAGGAGATCA TTCGTCGGGA TCTCTCCTTT TTGCTCAATA CCATTAGCCA CGAGGGTGAC
ATCGACGCCC GGCGCTATCC GCAGGCGGCG GCGTCAGTGC TCAACTATGG CCTGCCGCCG
CTGGCGGGCA GCTTTATGTA TGAGCATAAG TGGGACGATA TCAGCGAGGC GATCCGGCGC
GCCATTATCC GTTTCGAACC CCGGCTGAAC GCCGCCACAC TCAGGGTCAC GCCATTGCTC
GATAAAACCC GGCAGGGTAG CTATAACACG CTACAGTTTG AAATTCGCGG ACAAATTCTG
ACGCAGCCGT ATCCCACGGA GTTTCTGGTA CGCAGCGCGC TGGATATGGA GCTGAGCCGC
ATTACGTTCT TTTAA
 
Protein sequence
MSTSRFTPAN HLLPTLFDRL CDNAPYQKID RDISVTPVQL KEIIRRDLSF LLNTISHEGD 
IDARRYPQAA ASVLNYGLPP LAGSFMYEHK WDDISEAIRR AIIRFEPRLN AATLRVTPLL
DKTRQGSYNT LQFEIRGQIL TQPYPTEFLV RSALDMELSR ITFF