Gene SeD_A0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0175 
Symbol 
ID6872319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp187253 
End bp187615 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content52% 
IMG OID642783422 
Producthypothetical protein 
Protein accessionYP_002214116 
Protein GI198245043 
COG category[S] Function unknown 
COG ID[COG3112] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0247375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTACG AATTTCTGCG CGACGTTACC GGAGGGGTAA AAGTACGAAT GTCGATGGGC 
CACGAGGTGG TCGGTCACTG GTTTAATGAA GAGGTTAAAG ACAACCTCTC GCTACTGGAT 
GAAGTAGAAC AAGCCGCGCG TACGGTCAAA GGCAGCGAAC GCTCCTGGCA ACGAGCAGGG 
CATGAATACA CGATCTGGAT GGACGGCGAA GAAGTGATGA TTCGCGCCAA TCAACTGGAT 
TTTTCCGGCG ATGAGATGGA AGAGGGGATG AGTTATTACG ATGAAGAGAG TTTATCCCTG 
TGCGGCATGG AGGATTTTCT GCGGGTCGTC GCCGCGTATC GGGAATTCGT CAGTAAAGCC 
TGA
 
Protein sequence
MDYEFLRDVT GGVKVRMSMG HEVVGHWFNE EVKDNLSLLD EVEQAARTVK GSERSWQRAG 
HEYTIWMDGE EVMIRANQLD FSGDEMEEGM SYYDEESLSL CGMEDFLRVV AAYREFVSKA