Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0165 |
Symbol | aceE |
ID | 6871726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 173519 |
End bp | 176182 |
Gene Length | 2664 bp |
Protein Length | 887 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642783412 |
Product | pyruvate dehydrogenase subunit E1 |
Protein accession | YP_002214106 |
Protein GI | 198244269 |
COG category | [C] Energy production and conversion |
COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0408013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGAAC GTTTCCAAAA TGACGTGGAT CCGATCGAAA CTCGCGACTG GCTACAGGCG ATCGAATCGG TCATCCGTGA AGAAGGTGTT GAGCGCGCTC AGTATCTGAT TGACCAACTG CTTTCTGAAG CTCGTAAAGG CGGCGTGAAA GTCGCGGCAG GCGCAGGGGC CAGTAATTAC ATCAACACTA TTGCCGTTGA AGACGAACCG GAATACCCGG GTAATCTGGA GCTGGAACGT CGCATTCGTT CTGCTATCCG CTGGAACGCC ATCATGACCG TGCTGCGCGC GTCTAAAAAA GACCTTGAGT TGGGCGGCCA CATGGCGTCC TTCCAGTCTT CCGCCACGAT CTATGATGTC TGTTTCAACC ATTTCTTCCG TGCGCGCAAC GAACAGGATG GCGGCGACCT GGTATACTTC CAGGGCCACA TCTCTCCGGG CATCTACGCT CGCGCGTTCC TGGAAGGTCG TCTGACCCAG GAACAGATGG ATAACTTCCG TCAGGAAGTT CACGGCAATG GCCTCTCTTC CTATCCGCAC CCGAAACTGA TGCCGGAATT CTGGCAGTTC CCGACCGTCT CTATGGGTCT GGGCCCAATC GGTGCTATCT ACCAGGCGAA ATTCCTGAAA TATCTGGAAC ACCGCGGCCT GAAAGATACC TCTAAACAAA CCGTTTACGC CTTCCTCGGC GACGGCGAGA TGGATGAGCC GGAATCCAAA GGCGCGATCA CCATCGCCAC CCGTGAAAAA CTGGACAACC TGGTCTTTGT TATCAACTGT AACCTGCAGC GTCTTGACGG CCCGGTCACC GGTAACGGCA AGATTGTTAA CGAACTGGAA GGCATCTTTG CAGGTGCTGG CTGGAACGTT ATCAAAGTCA TGTGGGGCGG TCGTTGGGAT GAACTGCTGC GTAAAGACAC CAGCGGTAAG CTTATCCAGC TGATGAACGA AACCGTTGAC GGCGACTACC AGACCTTCAA ATCCAAAGAC GGCGCTTACG TGCGTGAGCA CTTCTTCGGT AAATACCCGG AAACCGCAGC CCTGGTGGCC GACTGGACCG ATGAGCAGAT TTGGGCGCTG AACCGCGGTG GTCACGATCC GAAGAAAGTC TATGCTGCAC TGAAAAAAGC GCAGGAAACC AAAGGCAAAG CGACCGTAAT CCTGGCCCAT ACCATTAAAG GTTACGGCAT GGGCGACACC GCGGAAGGCA AAAACATCGC TCACCAGGTG AAGAAAATGA ACATGGACGG CGTGCGTTAC GTCCGCGATC GTTTCAACGT GCCGGTTGCC GATGCTGATC TCGAAAAACT GCCGTACATT ACCTTCCCGG AAGGTTCTGA AGAACACAAA TACCTGCATG AACGCCGTCA GGCGCTGCAT GGCTACCTGC CAAGCCGTCA GCCGAACTTC ACCGAGAAGT TAGAGCTGCC TCAACTTTCA GATTTCGGCG CGCTGCTGGA AGAGCAAAGT AAAGAGATTT CCACTACGAT CGCTTTCGTG CGTGCCCTGA ACGTGATGCT GAAGAACAAG TCGATCAAAG ATCGTCTGGT TCCGATCATC GCCGACGAAG CGCGTACTTT CGGTATGGAA GGTCTGTTCC GTCAGATTGG TATCTACAGC CCGAACGGCC AGCAGTACAC CCCGCAGGAC CGTGAGCAGG TTGCTTACTA CAAAGAAGAC GAGAAAGGCC AGATTCTGCA GGAAGGTATC AACGAGCTGG GCGCAGGCGC ATCCTGGCTG GCTGCGGCGA CCTCTTACAG CACCAACGAT CTGCCGATGA TCCCGTTCTA CATCTACTAC TCTATGTTCG GGTTCCAGCG TATCGGCGAC CTGTGCTGGC AGGCTGGCGA CCAGCAGGCT CGCGGCTTTC TGATCGGCGG GACTTCCGGT CGTACTACGC TGAACGGCGA AGGTCTGCAG CACGAAGATG GTCACAGCCA CATTCAGTCG CTGACTATCC CGAACTGTAT CTCTTACGAC CCGGCTTACG CTTACGAAGT GGCTGTCATC ATGCATGATG GTCTGGAGCG TATGTACGGT GAGAAACAAG AGAACGTTTA CTACTACATC ACCACGCTGA ACGAAAACTA CCACATGCCG GCCATGCCAG CAGGTGCCGA GGAAGGTATC CGTAAAGGTA TCTACAAACT CGAAACCCTC GAAGGTAGCA AAGGTAAAGT TCAGCTGCTG GGCTCCGGTT CTATCCTGCG TCACGTGCGT GAAGCAGCAC AGATCCTGGC GAAAGATTAC GGCGTAGGTT CTGACGTATA TAGCGTGACC TCCTTCACCG AACTGGCGCG TGATGGTCAG GATTGTGAAC GCTGGAACAT GCTGCACCCG CTGGAAACCC CGCGCGTTCC GTACATCGCT CAGGTGATGA ACGACGCTCC GGCTGTAGCA TCTACTGACT ATATGAAACT GTTCGCCGAG CAGGTTCGTA CTTACGTACC GGCTGACGAC TATCGCGTAC TGGGTACGGA TGGCTTCGGT CGTTCCGACA GCCGTGAGAA CCTGCGTCAC CACTTCGAAG TTGATGCTTC TTATGTGGTT GTCGCAGCGC TGGGCGAACT GGCTAAACGT GGCGAAATCG ACAAGAAAGT GGTAGCGGAT GCGATTACCA AATTCAACAT CGATGCAGAT AAAGTTAACC CGCGTCTGGC GTAA
|
Protein sequence | MSERFQNDVD PIETRDWLQA IESVIREEGV ERAQYLIDQL LSEARKGGVK VAAGAGASNY INTIAVEDEP EYPGNLELER RIRSAIRWNA IMTVLRASKK DLELGGHMAS FQSSATIYDV CFNHFFRARN EQDGGDLVYF QGHISPGIYA RAFLEGRLTQ EQMDNFRQEV HGNGLSSYPH PKLMPEFWQF PTVSMGLGPI GAIYQAKFLK YLEHRGLKDT SKQTVYAFLG DGEMDEPESK GAITIATREK LDNLVFVINC NLQRLDGPVT GNGKIVNELE GIFAGAGWNV IKVMWGGRWD ELLRKDTSGK LIQLMNETVD GDYQTFKSKD GAYVREHFFG KYPETAALVA DWTDEQIWAL NRGGHDPKKV YAALKKAQET KGKATVILAH TIKGYGMGDT AEGKNIAHQV KKMNMDGVRY VRDRFNVPVA DADLEKLPYI TFPEGSEEHK YLHERRQALH GYLPSRQPNF TEKLELPQLS DFGALLEEQS KEISTTIAFV RALNVMLKNK SIKDRLVPII ADEARTFGME GLFRQIGIYS PNGQQYTPQD REQVAYYKED EKGQILQEGI NELGAGASWL AAATSYSTND LPMIPFYIYY SMFGFQRIGD LCWQAGDQQA RGFLIGGTSG RTTLNGEGLQ HEDGHSHIQS LTIPNCISYD PAYAYEVAVI MHDGLERMYG EKQENVYYYI TTLNENYHMP AMPAGAEEGI RKGIYKLETL EGSKGKVQLL GSGSILRHVR EAAQILAKDY GVGSDVYSVT SFTELARDGQ DCERWNMLHP LETPRVPYIA QVMNDAPAVA STDYMKLFAE QVRTYVPADD YRVLGTDGFG RSDSRENLRH HFEVDASYVV VAALGELAKR GEIDKKVVAD AITKFNIDAD KVNPRLA
|
| |