Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0145 |
Symbol | secA |
ID | 6873725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 154243 |
End bp | 156948 |
Gene Length | 2706 bp |
Protein Length | 901 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642783393 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_002214087 |
Protein GI | 198243171 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAATCA AATTATTAAC CAAAGTATTC GGTAGCCGTA ACGATCGTAC GCTGCGTCGT ATGCGTAAGG CCGTCAGCCT TATTAATGCG ATGGAACCGG AGATGGAAAA ACTCTCCGAT GACGAACTGA AAGCGAAAAC CAACGAATTT CGCGCCCGTA TTGAAAAAGG CGAAAGCGTA GAGAGCCTGA TTCCGGAAGC GTTCGCGGTG GTGCGTGAAG CCAGTAAACG CGTCTTTGGG ATGCGTCACT TCGACGTTCA GCTATTGGGT GGTATGGTGC TCAACGATCG CTGTATCGCC GAAATGCGTA CTGGTGAAGG TAAAACGCTG ACCGCAACGC TACCAGCCTA CCTGAACGCG CTGTCCGGCA AAGGCGTTCA TGTGGTAACC GTGAACGACT ATCTGGCGCA GCGTGACGCC GAAAACAACC GCCCGCTATT CGAATTCCTC GGTATGTCCG TTGGTATCAA CCTGCCAGGT ATGCCTGCGC CAGCCAAACG TGAAGCTTAC GCTGCCGACA TCACTTACGG CACTAACAAC GAATACGGTT TTGACTACCT GCGCGACAAC ATGGCGTTCA GCCCGGAAGA GCGCGTGCAG CGTAAACTGC ATTATGCGCT GGTGGATGAA GTCGACTCCA TCCTGATCGA TGAAGCGCGT ACGCCGCTGA TTATTTCCGG CCCGGCGGAA GATAGCTCGG AAATGTACAA AAAAGTGAAC AAAATCATTC CGCACCTGAT TCGTCAGGAG AAAGAAGATT CTGACACTTT CCAGGGCGAA GGCCACTTCT CCGTTGATGA GAAAGCGCGC CAGGTTAACC TGACCGAACG CGGTCTGGTG CTGATCGAAG AGCTACTGGT GCAAGAAGGC ATTATGGATG AAGGCGAGTC GCTCTACTCG CCTGGCAATA TTATGTTGAT GCATCACGTC ACCGCCGCGC TGCGCGCGCA CGCGCTGTTT ACCCGTGACG TGGATTACAT TGTGAAAGAC GGCGAAGTCA TCATTGTTGA TGAACATACC GGTCGTACCA TGCAGGGGCG TCGCTGGTCT GACGGTCTGC ACCAGGCGGT AGAAGCGAAA GAAGGCGTTG AAATTCAGAA TGAAAACCAG ACGCTGGCGT CTATTACCTT CCAGAACTAC TTCCGTCTGT ATGAAAAGCT GGCCGGTATG ACCGGTACGG CGGATACTGA AGCCTTCGAA TTTAGTTCTA TCTATAAGCT GGACACCGTC GTTGTTCCGA CCAACCGTCC GATGATCCGT AAAGATTTGC CGGATCTGGT CTACATGACC GAAGCGGAAA AAATCCAGGC CATTATCGAA GATATTAAAG AACGTACCGC GAACGGTCAG CCAGTGCTGG TCGGGACGAT TTCTATCGAG AAATCTGAAG TGGTCTCCAG AGAGCTGACC AAAGCGGGCA TCAAACATAA CGTACTGAAC GCAAAATTCC ACGCCAACGA AGCAGGCATC GTTGCGCAGG CTGGTTATCC AGCGGCGGTC ACTATCGCTA CCAACATGGC GGGTCGTGGT ACCGATATTA TGCTGGGCGG TAGCTGGCAG GCGGAAGTCG CTGCGCTGGA AGCGCCGACG GAAGAACAGA TTGCGCAGAT TAAAGCGGAC TGGCAGGTAC GCCATGACGC GGTTCTGGCT GCCGGCGGCC TGCATATCAT TGGCACCGAG CGCCATGAAT CCCGCCGTAT CGACAACCAG CTGCGTGGCC GTTCCGGTCG CCAGGGCGAT CCGGGTTCTT CCCGTTTCTA CCTGTCGATG GAAGATGCGC TGATGCGTAT TTTCGCCTCC GATCGTGTCT CCGGTATGAT GCGTAAACTG GGGATGAAGC CGGGCGAAGC GATTGAGCAC CCGTGGGTGA CGAAAGCTAT CGCTAACGCG CAGCGTAAAG TAGAAAGCCG TAACTTCGAT ATTCGTAAGC AACTGCTGGA ATATGATGAT GTGGCGAACG ATCAGCGTCG TGCAATTTAT ACCCAGCGTA ACGAACTGCT GGATGTGTCT GACGTGAGCG ACACCATTAA CAGCATTCGC GAAGATGTCT TTAAGGCGAC TATCGACGCC TACATTCCGC CGCAGTCGCT GGAAGAGATG TGGGATATCC CGGGTTTGCA GGAACGCCTG AAAAACGACT TCGACCTGGA GATGCCGATT GCCGAATGGC TGGATAAAGA GCCGGAGCTG CATGAGGAGA CGCTGCGTGA GCGCATCCTG GCGCAGTCCA TCGAGGTGTA TCAGCGTAAA GAAGAGGTGG TTGGCGCTGA AATGATGCGT CATTTCGAAA AAGGCGTGAT GCTGCAAACG CTCGATTCCC TGTGGAAAGA GCACCTGGCG GCGATGGATT ACCTGCGTCA GGGTATTCAT CTGCGCGGCT ATGCGCAAAA AGATCCGAAG CAGGAATACA AGCGCGAATC CTTCGCTATG TTCGCCGCGA TGCTGGAATC GCTGAAATAT GAAGTGATCA GTACCCTGAG CAAAGTCCAG GTACGTATGC CTGAAGAGGT CGAAGCGATG GAAATGCAGC GTCGCGAAGA GGCGGAGCGC CTGGCGCAGA TGCAGCAGCT AAGCCATCAG GATGACGATG CCGCCGTGGC TGCCGATCTG GCCGCCCAAA CCGGCGAACG TAAGATTGGA CGTAACGATC CTTGCCCTTG CGGTTCCGGT AAGAAATACA AACAGTGTCA TGGTCGCCTG AGCTAA
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Protein sequence | MLIKLLTKVF GSRNDRTLRR MRKAVSLINA MEPEMEKLSD DELKAKTNEF RARIEKGESV ESLIPEAFAV VREASKRVFG MRHFDVQLLG GMVLNDRCIA EMRTGEGKTL TATLPAYLNA LSGKGVHVVT VNDYLAQRDA ENNRPLFEFL GMSVGINLPG MPAPAKREAY AADITYGTNN EYGFDYLRDN MAFSPEERVQ RKLHYALVDE VDSILIDEAR TPLIISGPAE DSSEMYKKVN KIIPHLIRQE KEDSDTFQGE GHFSVDEKAR QVNLTERGLV LIEELLVQEG IMDEGESLYS PGNIMLMHHV TAALRAHALF TRDVDYIVKD GEVIIVDEHT GRTMQGRRWS DGLHQAVEAK EGVEIQNENQ TLASITFQNY FRLYEKLAGM TGTADTEAFE FSSIYKLDTV VVPTNRPMIR KDLPDLVYMT EAEKIQAIIE DIKERTANGQ PVLVGTISIE KSEVVSRELT KAGIKHNVLN AKFHANEAGI VAQAGYPAAV TIATNMAGRG TDIMLGGSWQ AEVAALEAPT EEQIAQIKAD WQVRHDAVLA AGGLHIIGTE RHESRRIDNQ LRGRSGRQGD PGSSRFYLSM EDALMRIFAS DRVSGMMRKL GMKPGEAIEH PWVTKAIANA QRKVESRNFD IRKQLLEYDD VANDQRRAIY TQRNELLDVS DVSDTINSIR EDVFKATIDA YIPPQSLEEM WDIPGLQERL KNDFDLEMPI AEWLDKEPEL HEETLRERIL AQSIEVYQRK EEVVGAEMMR HFEKGVMLQT LDSLWKEHLA AMDYLRQGIH LRGYAQKDPK QEYKRESFAM FAAMLESLKY EVISTLSKVQ VRMPEEVEAM EMQRREEAER LAQMQQLSHQ DDDAAVAADL AAQTGERKIG RNDPCPCGSG KKYKQCHGRL S
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