| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0135 |
|---|
| Symbol | murD |
|---|
| ID | 6874259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 143016 |
|---|
| End bp | 144332 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642783384 |
|---|
| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
|---|
| Protein accession | YP_002214078 |
|---|
| Protein GI | 198243206 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
|---|
| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATT ACCAGGACAA AAACGTCGTC ATTATTGGTC TGGGCTTAAC CGGACTCTCT
TGCGTGGACT TTTTTCTCGC TCGCGGCGTG ACGCCGCGGG TGATGGATAC TCGCGTGACG
CCGCCGGGTC TGGATAAGCT GCCGCAAGAG GTTGAGCGTC ACGTTGGCGG CCTGAACGAC
GAGTGGCTCT TAGCGGCGGA TTTAATCGTC GCCAGCCCTG GTATTGCTCT GGCGCACCCT
TCGCTGAGCG CTGCCGCCAG CGCTGGAGTA GAAATTGTCG GCGATATCGA ACTGTTTTGC
CGCGAAGCGC AAGCGCCGAT TGTAGCCATC ACCGGCTCGA ACGGCAAAAG CACCGTGACC
ACCTTAGTGG GCGAGATGGC GAAAGCGGCG GGCGTCAATG TCGGCGTTGG CGGCAATATC
GGTCTTCCGG CGCTGATGCT GCTGGATGCC GATCGCGAAT TGTACGTGCT GGAATTATCC
AGTTTCCAAC TGGAAACTAC CTCAAGTTTG CAAGCGGCGG CGGCAACGGT GCTCAACGTC
ACTGAAGATC ATATGGACCG GTATCCGTTT GGTTTGCAAC AGTACCGGGC GGCGAAACTG
CGCGTCTACG AGAAGGCGAA AGTGTGCGTA GTGAATGCCG ATGATGCGTT GACGATGCCG
GTTCGTGGGG CCGATGAGCG CTGCGTCAGC TTTGGCGTCA ATATGGGCGA TTATCACCTT
AATCGTCAGC AGGGCGAAAC CTGGCTGCGA GTCAAAGGCG AGAAGGTGCT GAACGTGAAA
GAGATGAAGC TTTCCGGTCA GCATAACTAT ACCAATGCGT TAGCGGCGCT GGCGCTGGCG
GATGCCGTAG GTCTGCCGCG CGCCAGCAGT TTGAAGGCGT TGACGACATT TACTGGTCTG
GCGCATCGCT TCCAGCTGGC GTTGGAGCAT AACGGCGTAC GTTGGATCAA CGACTCGAAA
GCGACCAACG TCGGCAGTAC CGAAGCGGCG CTAAACGGTT TGCATGTGGA CGGTACGCTA
CATCTGCTGC TGGGCGGCGA CGGTAAGTCG GCAGACTTTT CTCCGCTGAC ACGCTATCTG
ACCGGCGATC GTATCCGCCT GTATTGCTTT GGGCGCGATG GCGCGCAGCT TGCCGCACTG
CGTCCGGAAA TCGCCCAACA GACTGAGACG ATGGAAGAGG CGATGCGTTT GCTGGCGCCG
CGCGTTCAGC CGGGTGATAT GGTGCTGCTG TCGCCCGCCT GCGCCAGCCT CGATCAGTTT
AAAAATTTTG AGCAACGGGG CGATGTCTTT ACCCGTCTGG CGAAGGAGTT AGGTTGA
|
|---|
| Protein sequence | MADYQDKNVV IIGLGLTGLS CVDFFLARGV TPRVMDTRVT PPGLDKLPQE VERHVGGLND
EWLLAADLIV ASPGIALAHP SLSAAASAGV EIVGDIELFC REAQAPIVAI TGSNGKSTVT
TLVGEMAKAA GVNVGVGGNI GLPALMLLDA DRELYVLELS SFQLETTSSL QAAAATVLNV
TEDHMDRYPF GLQQYRAAKL RVYEKAKVCV VNADDALTMP VRGADERCVS FGVNMGDYHL
NRQQGETWLR VKGEKVLNVK EMKLSGQHNY TNALAALALA DAVGLPRASS LKALTTFTGL
AHRFQLALEH NGVRWINDSK ATNVGSTEAA LNGLHVDGTL HLLLGGDGKS ADFSPLTRYL
TGDRIRLYCF GRDGAQLAAL RPEIAQQTET MEEAMRLLAP RVQPGDMVLL SPACASLDQF
KNFEQRGDVF TRLAKELG
|
|---|
| |