Gene SeD_A0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0127 
SymbolfruR 
ID6874805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp133953 
End bp134957 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content57% 
IMG OID642783376 
ProductDNA-binding transcriptional regulator FruR 
Protein accessionYP_002214070 
Protein GI198242108 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID[TIGR02417] D-fructose-responsive transcription factor 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTGG ATGAAATCGC TCGGCTGGCC GGTGTCTCGC GCACAACTGC AAGCTACGTT 
ATAAACGGTA AAGCAAAGCA ATACCGCGTG AGCGACAAAA CCGTAGAAAA AGTCATGGCG
GTAGTGCGTG AGCACAATTA CCATCCTAAC GCTGTGGCTG CCGGGCTGCG TGCTGGACGC
ACACGTTCCA TTGGTCTGGT GATCCCGGAC CTTGAAAACA CGAGCTACAC CCGTATCGCA
AACTATCTTG AGCGCCAGGC ACGCCAGCGT GGCTACCAAC TGCTGATCGC CTGTTCTGAA
GATCAGCCGG ATAACGAAAT GCGCTGCATT GAGCACCTTT TGCAACGCCA GGTGGATGCA
ATCATTGTTT CAACTTCGTT ACCGCCGGAG CATCCCTTCT ATCAGCGCTG GGCCAACGAT
CCGTTCCCCA TCGTCGCGCT CGACCGCGCG CTGGATCGCG AACATTTCAC CAGCGTGGTC
GGTGCCGATC AGGATGATGC CGAGATGTTG GCGGAAGAGC TGCGTAAATT CCCGGCGGAA
ACGGTGCTTT ATTTGGGCGC GCTGCCGGAG TTGTCCGTCA GTTTCCTGCG CGAGCAGGGG
TTCCGCACCG CATGGAAAGA CGATCCGCGG GAGGTGAATT TCTTATATGC CAACAGCTAT
GAGCGCGAAG CCGCCGCGCA GCTGTTTGAG AAATGGCTGG AAACGCATCC TATGCCGCAG
GCGCTCTTTA CGACATCATT CGCGCTATTA CAGGGCGTGA TGGACGTTAC GCTGCGGCGC
GATGGAAAAC TGCCTTCGGA TTTGGCGATT GCGACCTTCG GCGATCATGA GCTGCTGGAT
TTTCTGCAAT GCCCGGTACT GGCGGTGGCG CAGCGTCATC GTGATGTCGC GGAACGCGTG
CTGGAGATTG TGCTGGCAAG TCTTGATGAA CCGCGTAAAC CGAAACCCGG CTTAACGCGT
ATTCGGCGAA ACCTGTATCG TCGCGGCATT CTGAGCCGTA GCTAA
 
Protein sequence
MKLDEIARLA GVSRTTASYV INGKAKQYRV SDKTVEKVMA VVREHNYHPN AVAAGLRAGR 
TRSIGLVIPD LENTSYTRIA NYLERQARQR GYQLLIACSE DQPDNEMRCI EHLLQRQVDA
IIVSTSLPPE HPFYQRWAND PFPIVALDRA LDREHFTSVV GADQDDAEML AEELRKFPAE
TVLYLGALPE LSVSFLREQG FRTAWKDDPR EVNFLYANSY EREAAAQLFE KWLETHPMPQ
ALFTTSFALL QGVMDVTLRR DGKLPSDLAI ATFGDHELLD FLQCPVLAVA QRHRDVAERV
LEIVLASLDE PRKPKPGLTR IRRNLYRRGI LSRS