Gene SeD_A0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0109 
Symbol 
ID6873968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp117901 
End bp118668 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content57% 
IMG OID642783362 
Productinner membrane protein YabI 
Protein accessionYP_002214056 
Protein GI198245108 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAC TGCTGGAACA TTTTATCACC CAATCCACTC TGTATTCGCT TATCGCCGTG 
TTGCTGGTCG CCTTCCTGGA ATCGCTGGCG CTGGTGGGGT TGATTTTACC CGGCACGGTA 
CTGATGGCGG GGCTGGGCGC GCTTATCGGC AGCGGCGAGC TCAATTTTTG GCATGCCTGG 
CTGGTGGGTA TTATCGGCTG TCTGATGGGC GACTGGATTT CGTTCTGGCT GGGGTGGCGC 
TTTAAAAAGC CGCTACACCG CTGGTCTTTT ATGAAAAAAA ACAAGTCGCT GCTGGATAAA 
ACCGAACACG CGCTGCATCA GCACAGTATG TTCACGATCC TGGTCGGACG TTTTGTCGGT 
CCGACGAGGC CGCTGGTGCC GATGGTGGCA GGGATGCTGG ATCTTCCCGT GGCGAAATTT 
ATTGGGCCAA ACTTGATTGG CTGTTTGCTG TGGCCACCGT TTTATTTCCT GCCGGGCATT 
CTGGCGGGAG CGGCAATCGA TATTCCTTCT GATATGCAGA GCGGAGATTT CAAATGGCTG 
CTGCTGGCTA CGGCGTTGCT GCTGTGGGTC GGAGGCTGGC TATGCTGGCG GCTGTGGCGC 
AGCGGCAAAG CGGCAGTCGA TCGTTTAACC GCGTATCTCC CCCGCAGCCG TTTGCTGTAT 
CTGGCGCCGT TGACGCTCGG GAGCGGCGTG GTCGCGCTGG TGGTGCTGAT TCGCCACCCG 
CTGATGCCGG TATATATCGA TATTCTGCGC AAAGTTGTGG GTTACTAA
 
Protein sequence
MQALLEHFIT QSTLYSLIAV LLVAFLESLA LVGLILPGTV LMAGLGALIG SGELNFWHAW 
LVGIIGCLMG DWISFWLGWR FKKPLHRWSF MKKNKSLLDK TEHALHQHSM FTILVGRFVG 
PTRPLVPMVA GMLDLPVAKF IGPNLIGCLL WPPFYFLPGI LAGAAIDIPS DMQSGDFKWL 
LLATALLLWV GGWLCWRLWR SGKAAVDRLT AYLPRSRLLY LAPLTLGSGV VALVVLIRHP 
LMPVYIDILR KVVGY