Gene SeD_A0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0106 
SymbolaraA 
ID6871979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp113375 
End bp114877 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content56% 
IMG OID642783359 
ProductL-arabinose isomerase 
Protein accessionYP_002214053 
Protein GI198243370 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2160] L-arabinose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTT TTGATAATTA TGAAGTATGG TTTGTGATTG GCAGCCAGCA TTTGTATGGC 
GCAGAAACCC TGCGCCAGGT CACCCAACAT GCCGAGCATG TGGTCAACGC GCTGAATACC 
GAAGCTAAAC TGCCATGTAA ACTGGTATTA AAACCGCTGG GCACCTCGCC GGATGAGATT 
ACCGCCATTT GTCGTAACGC CAATTATGAC GATCGCTGCG CGGGGCTGGT GGTCTGGCTG 
CACACCTTCT CCCCGGCCAA AATGTGGATC AACGGGCTGA GTATCCTTAA CAAACCACTA 
CTGCAATTCC ATACCCAATT TAACGCCGCC CTGCCGTGGG ACAGCATCGA TATGGACTTT 
ATGAACCTGA ACCAGACTGC GCACGGCGGC CGCGAGTTCG GGTTTATCGG CGCGCGGATG 
CGCCAGCAGC ACTCGGTCGT CACTGGCCAC TGGCAGGATA AAGAGGCCCA TACGCGTATC 
GGCGCCTGGA TGCGCCAGGC GGTCTCTAAA CAGGATACCC GCCAGCTAAA AGTCTGCCGC 
TTCGGCGACA ATATGCGTGA AGTCGCAGTG ACTGACGGTG ATAAAGTGGC CGCGCAAATC 
AAATTTGGCT TTTCGGTCAA TACCTGGGCG GTCGGCGATC TGGTGCAGGT GGTGAACGCA 
ATTAGTGACG GCGATATCAA CGCTCTGATT GACGAGTATG AAAGCAGCTA TACCCTGACG 
CCCGCCACCC GGATCCACGG CGATAAACGC CAGAACGTGC GGGAAGCGGC GCGCATTGAA 
CTCGGTATGA AGCGTTTCCT GGAACAGGGC GGATTCCACG CCTTTACGAC GACATTTGAA 
GATTTGCACG GCCTGAAACA ACTTCCGGGT CTGGCCGTAC AGCGTCTGAT GCAACAGGGC 
TACGGCTTTG CGGGCGAAGG CGACTGGAAA ACCGCCGCTC TGCTTCGCAT TATGAAAGTA 
ATGTCAACCG GTCTGCAGGG CGGCACCTCA TTTATGGAGG ATTACACCTA CCACTTCGAG 
AAAGGCAACG ATCTGGTGCT CGGCTCGCAC ATGCTGGAAG TGTGTCCCTC CATCGCGGTG 
GAAGAGAAAC CGATCCTCGA CGTCCAGCAC CTCGGCATTG GCGGCAAGGA AGATCCGGCG 
CGTTTGATTT TCAATACCCA AACCGGCCCG GCGATCGTCG CCAGCCTGAT CGACCTCGGC 
GATCGTTACC GCCTGCTGGT CAACTGCATT GACACCGTAA AAACGCCGCA CTCCCTGCCG 
AAACTGCCGG TGGCTAACGC GCTGTGGAGG GCGCAGCCGG ATCTGCCGAC CGCCTCCGAA 
GCATGGATTC TGGCTGGCGG CGCGCACCAT ACCGTCTTCA GCCACGCGCT GGATCTGAAC 
GATATGCGCC AGTTTGCAGA AATACACGAT ATCGAAATCG CGGTGATTGA TAACGATACC 
CGTCTGCCAG CCTTTAAGGA CGCGCTGCGC TGGAACGAGG TGTATTACGG GTTCAAACGT 
TAA
 
Protein sequence
MTIFDNYEVW FVIGSQHLYG AETLRQVTQH AEHVVNALNT EAKLPCKLVL KPLGTSPDEI 
TAICRNANYD DRCAGLVVWL HTFSPAKMWI NGLSILNKPL LQFHTQFNAA LPWDSIDMDF 
MNLNQTAHGG REFGFIGARM RQQHSVVTGH WQDKEAHTRI GAWMRQAVSK QDTRQLKVCR 
FGDNMREVAV TDGDKVAAQI KFGFSVNTWA VGDLVQVVNA ISDGDINALI DEYESSYTLT 
PATRIHGDKR QNVREAARIE LGMKRFLEQG GFHAFTTTFE DLHGLKQLPG LAVQRLMQQG 
YGFAGEGDWK TAALLRIMKV MSTGLQGGTS FMEDYTYHFE KGNDLVLGSH MLEVCPSIAV 
EEKPILDVQH LGIGGKEDPA RLIFNTQTGP AIVASLIDLG DRYRLLVNCI DTVKTPHSLP 
KLPVANALWR AQPDLPTASE AWILAGGAHH TVFSHALDLN DMRQFAEIHD IEIAVIDNDT 
RLPAFKDALR WNEVYYGFKR