| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0075 |
|---|
| Symbol | |
|---|
| ID | 6872680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 80836 |
|---|
| End bp | 81432 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642783329 |
|---|
| Product | carnitine operon protein CaiE |
|---|
| Protein accession | YP_002214023 |
|---|
| Protein GI | 198243994 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 0.903191 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTATT ACGCCTTTGA AGGACTGATC CCGGTGGTGC ATCCGGACGC GTTTGTCCAT
CCCAGCGCCG TGCTGATTGG CGATGTCATC GTGGGCGCCG GTGTTTATAT TGGCCCACTC
GCGTCATTGC GTGGGGATTA TGGTCGCCTG ATCCTGGAGG CAGGCTCTAA TCTGCAGGAT
GGCTGCATTA TGCATGGCTA CTGCGATACC GATACCATCG TGCATGAAAA CGGCCATATC
GGCCACGGCG CTATTCTACA TGGCTGCGTG GTGGGACGGG ACGCCCTGGT CGGCATGAAC
AGCGTCATTA TGGACGGCGC AGTGATTGGC GAAGAGAGCA TTGTCGCCGC CATGAGTTTT
GTCAAAGCCG GATTTCAGGG TGAGGCAAGG CAACTGCTGG TGGGATCACC GGCGCGCGTA
CTACGCCAGG TTACGGACCA GGAGCTGCAC TGGAAACGCC TCAATACCAA AGAATATCAG
GATCTTGCGA TCCGTTGTCG AACGGGGTTA TCTGAAACGA AGCCGTTAAC GCAGGCCGAA
GAAAACCGAC CGCGCCTGAA AGGCACGACG GACGTGAAGC CAAAATCAGC ACAGTAA
|
|---|
| Protein sequence | MSYYAFEGLI PVVHPDAFVH PSAVLIGDVI VGAGVYIGPL ASLRGDYGRL ILEAGSNLQD
GCIMHGYCDT DTIVHENGHI GHGAILHGCV VGRDALVGMN SVIMDGAVIG EESIVAAMSF
VKAGFQGEAR QLLVGSPARV LRQVTDQELH WKRLNTKEYQ DLAIRCRTGL SETKPLTQAE
ENRPRLKGTT DVKPKSAQ
|
|---|
| |