Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0059 |
Symbol | |
ID | 6872491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 63546 |
End bp | 64847 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642783314 |
Product | oxaloacetate decarboxylase beta chain |
Protein accession | YP_002214008 |
Protein GI | 198242548 |
COG category | [C] Energy production and conversion |
COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.242955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.132607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGTC TGAACGCCCT GCTTCAGGGC ATGGGGCTGA TGCACCTTGG CGCAGGCCAG GCCATCATGC TGCTGGTCAG CCTGCTGCTG CTGTGGCTGG CGATTGCGAA AAAGTTCGAA CCGTTACTGC TGCTGCCGAT TGGCTTCGGC GGCCTGCTCT CCAACATCCC GGAAGCGGGT ATGGCGCTGA CCGCGCTGGA GAGCCTGCTG GCGCATCACG ACGCCGGGCA GCTGGCGGTG ATTGCCGCGA AGCTCAACTG CGCGCCGGAC GTGCATGCCA TTAAAGAGGC GTTAGCGCTG GCGCTACCGT CGGTGCAGGG CCAGATGGAG AACCTGGCGG TGGACATGGG CTACACGCCG GGGGTGCTGG CGCTGTTCTA TAAAGTGGCG ATTGGCTCCG GCGTCGCGCC GCTGGTCATC TTTATGGGCG TCGGCGCGAT GACCGACTTC GGCCCGCTGC TGGCCAACCC GCGCACCCTG CTGCTCGGCG CGGCGGCGCA GTTCGGCATC TTCGCCACCG TACTGGGGGC GCTGACGCTG AACTACTTCG GCCTGATTTC CTTCACCCTG CCGCAGGCGG CGGCCATCGG CATTATCGGC GGCGCGGACG GCCCGACGGC GATTTATCTG TCGGGCAAGC TGGCGCCGGA GCTGCTGGGG GCCATCGCGG TGGCGGCGTA CTCGTATATG GCGCTGGTAC CGCTAATCCA GCCGCCGATT ATGCGCGCGC TGACCAGCGA GAAAGAGCGC AAAATCCGCA TGGTGCAGCT GCGCACGGTG AGTAAGCGGG AAAAAATCCT CTTTCCGGTG GTGCTGTTAC TGCTGGTGGC GCTGCTGTTG CCGGACGCCG CACCGCTGCT GGGGATGTTC TGCTTTGGCA ATCTGATGCG TGAAAGCGGC GTGGTGGAGC GTCTGAGCGA CACGGTACAG AACGGGCTGA TTAATATCGT CACCATCTTC CTCGGGCTGT CGGTGGGCGC GAAGCTGGTA GCGGACAAGT TCCTGCAACC GCAGACGCTG GGCATTCTGC TGCTGGGGGT GATTGCGTTT GGTATCGGGA CGGCGGCCGG GGTGCTGATG GCGAAGCTGC TGAACCTGTG CAGTAAGAAC AAAATCAACC CGCTTATCGG TTCGGCGGGG GTCTCGGCGG TGCCGATGGC GGCCCGCGTA TCGAACAAAG TGGGGCTGGA ATCAGACCCG CAGAACTTCC TGCTGATGCA CGCGATGGGC CCGAACGTGG CGGGGGTAAT TGGCTCGGCC ATTGCCGCGG GCGTGATGCT GAAATACGTG CTGGCGATGT AA
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Protein sequence | MESLNALLQG MGLMHLGAGQ AIMLLVSLLL LWLAIAKKFE PLLLLPIGFG GLLSNIPEAG MALTALESLL AHHDAGQLAV IAAKLNCAPD VHAIKEALAL ALPSVQGQME NLAVDMGYTP GVLALFYKVA IGSGVAPLVI FMGVGAMTDF GPLLANPRTL LLGAAAQFGI FATVLGALTL NYFGLISFTL PQAAAIGIIG GADGPTAIYL SGKLAPELLG AIAVAAYSYM ALVPLIQPPI MRALTSEKER KIRMVQLRTV SKREKILFPV VLLLLVALLL PDAAPLLGMF CFGNLMRESG VVERLSDTVQ NGLINIVTIF LGLSVGAKLV ADKFLQPQTL GILLLGVIAF GIGTAAGVLM AKLLNLCSKN KINPLIGSAG VSAVPMAARV SNKVGLESDP QNFLLMHAMG PNVAGVIGSA IAAGVMLKYV LAM
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