Gene SeD_A0051 details

Gene Information

• Locus tag: SeD_A0051
• Symbol: lspA
• ID: 6875299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: +
• Start bp: 56687
• End bp: 57187
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642783307
• Product: lipoprotein signal peptidase
• Protein accession: YP_002214001
• Protein GI: 198246069
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 53
• Fosmid unclonability p-value: 0.0475146
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTAAAC CACTCTGTTC AACAGGACTA CGCTGGCTAT GGCTGGTAGT AGTCGTGCTG 
ATTATCGATT TGGGCAGCAA ATACCTGATC CTCCAGAATT TCGCTCTGGG GGATACGGTA 
GGGCTGTTCC CGTCGCTTAA TCTGCATTAT GCGCGTAACT ACGGCGCGGC TTTTAGCTTC 
CTGGCGGATA GCGGCGGCTG GCAGCGCTGG TTCTTTGCCG GGATTGCGAT AGGGATCTGC 
GTAATTCTTT TGGTGATGAT GTATCGCTCG AAAGCGACGC AGAAGCTGAA TAACATCGCT 
TATGCGTTAA TCATCGGCGG CGCGCTGGGT AACCTGTTCG ACCGCCTGTG GCACGGCTTT 
GTTGTCGATA TGATCGATTT TTACGTCGGC GACTGGCATT TCGCGACGTT CAACCTTGCC 
GATAGCGCGA TCTGTATCGG CGCGGCGCTG ATTGTACTGG AAGGCTTTTT GCCGAAGCCG 
ACAGCGAAAG AACAGGCATA A 

 

Protein sequence

MSKPLCSTGL RWLWLVVVVL IIDLGSKYLI LQNFALGDTV GLFPSLNLHY ARNYGAAFSF 
LADSGGWQRW FFAGIAIGIC VILLVMMYRS KATQKLNNIA YALIIGGALG NLFDRLWHGF 
VVDMIDFYVG DWHFATFNLA DSAICIGAAL IVLEGFLPKP TAKEQA