Gene SeD_A0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0032 
Symbol 
ID6874488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp33365 
End bp34369 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content38% 
IMG OID642783290 
Productputative transcriptional regulator 
Protein accessionYP_002213984 
Protein GI198244833 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.13566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.0308484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCAA TAAAAAATGC TAAAAAAATT GACTACAATC TGATCAAAGT GTTCGATACG 
GTTATTACTG AAGGAAATGC AACCAGGGCG GCGAGGAAAC TGGATGTCAC GCCTGCGGCG 
ATCTCTCAGG CTCTTCTTCG TTTACAAAAT CTTTATGGCG AAGAGTTATT TATCAGAACC 
CGCAAAGGAT TAGTTCCGTC CAGCAAAGGT AAATCGCTTC ACCAGGTATT TCGCCAGGCA 
ATTGAATCTA TAGAAAGCAC ACTGTGCGAT AAAACAGATG CTCAGGAGAG TAATGAACTC 
ATTGTTCTGG GAGGTGATAT CACTGAAAAT TACTATTTTC CAGCATTGCT GGATACTGTG 
TTGATGAATC GATATATTAT TAAACACTAT GCGATTAAAA AAACAGGGGA ATACTCACCA 
GCCTCCATGC TGACGCATGG CTATGCGGAT GTCATCATGG GAATTCTGGA AATTAAGAAT 
GAGATGATTG AAAGTTATCT TATTGATAAT TTATCTGATT TTGTTTGTGT TTGTGGTGAA 
AAAAGTCCAT TGGTTGGGCT TGAAAAAATT TCTTTATATA ATTTTTATGC TGCCAGACAT 
GCTGTCTATC ATTCAGATAT GTTCTCTTCT TTCACCGCTG ATAGCATTGA TTTATTCAAG 
AGTAGTACGC CTTATGCGGG GCGCAGAGAA ATAGGTTATT ATAGTGATTC ACTATTTGGA 
GTTATCGGTG TTGTTGAAAA AAGCGATATG GTTGCGATTT TGCCAGGAAA GATTGCTACT 
TATTTTAGAG ATGTGCGGCG TTATAATATA AAAATACTAC GTATGCCTGA TGAAATAATT 
TTTCGTATGT TACCCGTTTA TGCTTATCTG GCTACAAACA GCACCCATTA TAAAAATGCC 
AAAAAACTGA TATCAACATT TCAGTCGACC TTTCTTTTTA GCCAGGAAAA GCAGCCTGAC 
GCTTTGGTTG AAGGAAGCAC ATCCTTATGC GATTTGTCGG TTTAA
 
Protein sequence
MRPIKNAKKI DYNLIKVFDT VITEGNATRA ARKLDVTPAA ISQALLRLQN LYGEELFIRT 
RKGLVPSSKG KSLHQVFRQA IESIESTLCD KTDAQESNEL IVLGGDITEN YYFPALLDTV 
LMNRYIIKHY AIKKTGEYSP ASMLTHGYAD VIMGILEIKN EMIESYLIDN LSDFVCVCGE 
KSPLVGLEKI SLYNFYAARH AVYHSDMFSS FTADSIDLFK SSTPYAGRRE IGYYSDSLFG 
VIGVVEKSDM VAILPGKIAT YFRDVRRYNI KILRMPDEII FRMLPVYAYL ATNSTHYKNA 
KKLISTFQST FLFSQEKQPD ALVEGSTSLC DLSV